| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0022 |
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| Symbol | |
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| ID | 3909705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 22420 |
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| End bp | 23301 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637881903 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_483645 |
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| Protein GI | 86747149 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCAC TCGCGGGCAA GACGCTGTTC ATCACCGGGG CCAGCCGCGG CATCGGGCTG
GCGATCGCGC TGCGGGCGGC GCGCGACGGC GCCAATGTGG CGATCGCCGC CAAGACCGCC
GAGCCGCAGC CCAAGCTGAA GGGCACGATC TACACTGCGG CCGACGAGAT CCGCGCCGCC
GGCGGGCAGG CGCTGCCGCT GATCTGCGAC ATCCGCGACG AGGCGCAAGT GATCGCCGCG
ATCGACAAGA CGGTGGCCGA ATTCGGCGGC ATCGACATCT GCGTCAACAA TGCCAGCGCG
ATCAGCCTGA CCAATTCGCA GGCGACCGAC ATGAAGCGCT ACGACCTGAT GATGGGCATC
AACAGCCGCG GCACCTTCAT GGTGTCGAAA TACTGCATCC CGCATCTGAA GAAGGCGGCC
AACCCGCACA TCCTGATGCT GTCGCCGCCG CTCGACATGA AGGCGAAATG GTTCGCGGCC
TCGACCGCCT ACACCATGGC CAAATTCGGC ATGAGCATGG TGGTGCTGGG ATTGTCGGGT
GAATTGAAGG GCGCGGGAAT CGCCGTCAAC GCGCTGTGGC CGCGCACCAC CATCGCCACC
GCCGCGGTCG GCAATCTCTT GGGCGGCGAC GCGATGATGC GCGCCAGCCG CACGCCGGAG
ATCATGGGCG ACGCCGCGCA CGCGATCCTG ACCAAGCCGT CGCGCGACTT CACCGGGCAG
TTCTGCATCG ACGACAAGGT GCTGTATGAG GCCGGCGTCA CCGATTTCGA GCGCTACCGC
GTCGATCCGA GCGTGCCATT GATGTCGGAT TTCTTCGTGC CGGACGACGA CGTGCCCCCG
CCCGGCGTCA CCGTCGCGTC GCTGCCGGGC GCGAAGGGGT AG
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| Protein sequence | MSSLAGKTLF ITGASRGIGL AIALRAARDG ANVAIAAKTA EPQPKLKGTI YTAADEIRAA
GGQALPLICD IRDEAQVIAA IDKTVAEFGG IDICVNNASA ISLTNSQATD MKRYDLMMGI
NSRGTFMVSK YCIPHLKKAA NPHILMLSPP LDMKAKWFAA STAYTMAKFG MSMVVLGLSG
ELKGAGIAVN ALWPRTTIAT AAVGNLLGGD AMMRASRTPE IMGDAAHAIL TKPSRDFTGQ
FCIDDKVLYE AGVTDFERYR VDPSVPLMSD FFVPDDDVPP PGVTVASLPG AKG
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