| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5131 |
|---|
| Symbol | gidB |
|---|
| ID | 3370689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 6086071 |
|---|
| End bp | 6086715 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637655506 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_238196 |
|---|
| Protein GI | 66048355 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.896881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTCTA TGGTCACCCC GCAACACGCC CAAGAGTTAT CCACCGGTGC CCGGGAATTG
GGGATTGACC TCAGTCCGGC CCAGCACGAG CAATTGCTGG CGTATCTGGC GTTGTTGATC
AAGTGGAACA AGGCCTACAA CCTGACTGCG GTACGCAACC CGGACGAAAT GGTATCGAGG
CATCTGCTCG ACAGTCTCAG TGTGGTGCCC TTCATCGAAG GAACACGCTG GATCGACGTC
GGCAGCGGCG GTGGGATGCC CGGCATTCCC ATGGCCATCC TGTTTCCGGA GCGCAAAGTG
GCGCTGCTGG ACAGCAATGG CAAGAAAACC CGGTTTCAGA CCCAGGTCAA ACTTGAGCTG
AAACTGGATA ATCTTGAAGT TATCCACAGC CGTGCAGAAA GTTATCAGCC CGAAGTGCCT
TTCGACGGGA TCATCTCCCG TGCGTTCAGC AGCCTGGAAG ACTTCACCGG CTGGACCCGT
CACATGGGCG ACGTCAATAC ACGCTGGCTG GCAATGAAAG GGCTGCATCC TGACGATGAG
CTGGTAGCAT TGCCCTCGGA TTTTCACCTC GATAGCGCAC ACGCCTTGAC CGTTCCGGGT
TGCCAAGGCC AACGCCATCT GCTGATACTG CGCCGCACGG CATGA
|
|---|
| Protein sequence | MSSMVTPQHA QELSTGAREL GIDLSPAQHE QLLAYLALLI KWNKAYNLTA VRNPDEMVSR
HLLDSLSVVP FIEGTRWIDV GSGGGMPGIP MAILFPERKV ALLDSNGKKT RFQTQVKLEL
KLDNLEVIHS RAESYQPEVP FDGIISRAFS SLEDFTGWTR HMGDVNTRWL AMKGLHPDDE
LVALPSDFHL DSAHALTVPG CQGQRHLLIL RRTA
|
|---|
| |