Gene Psyr_5129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5129 
Symbol 
ID3370687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6084379 
End bp6085251 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content63% 
IMG OID637655504 
ProductParB-like partition protein 
Protein accessionYP_238194 
Protein GI66048353 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.968152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA AGAAACGAGG TCTCGGACGT GGGTTGGACG CACTTCTGAG CAGTCCAACC 
GTCAGTTCGC TGGAAGAACA GGCCGTCAAG GCCCCGCCAA GTGAGTTGCA GCATGTGCCG
CTGGACCTGA TCCAGCGCGG CAAGTACCAG CCGCGCCGGG ACATGGACCC GCAGGCACTC
GAAGAACTTG CGCAGTCGAT CAAGTCGCAG GGCGTGATGC AGCCGATCGT GGTGCGTCCT
ATCGGTGACA ACCGCTTCGA GATCATTGCG GGCGAGCGTC GCTGGCGTGC CAGCCAGCAG
GCGGGAGTCG AGACGATCCC GGCGATGGTC CGCGATGTGC CGGACGAAAC CGCGATTGCG
ATGGCGCTGA TCGAGAACAT CCAGCGTGAG GACCTCAACC CGATCGAAGA GGCCATGGCA
CTGCAGCGCC TGCAGCAGGA GTTTCAACTG ACCCAGCAGC AGGTGGCCGA TGCCGTCGGC
AAGTCGCGAG TCAGTGTGGC CAACCTGTTA CGCCTGATTG CCTTGCCGGA GGCCATCAAG
ACGATGCTGT CTCATGGCGA CCTGGAAATG GGTCATGCTC GCGCCTTGCT CGGGCTGGGT
GAAGATCGGC AGGTCGAAGG TGCGCGACAC GTTGTCGCAC GCGGGCTTAC CGTGCGCCAG
ACCGAAGCAC TGGTCAGGCA GTGGCTGAGC GGCAAGGCAG AGGCTGCCGA GCCGGTGAAG
ACCGACCCGG ACATCAGCCG CCTGGAACAG CGCCTGGCCG AGCGTCTGGG CTCTGCAGTG
CAGATTCGTC ACGGTCAGAA GGGCAAAGGG CAATTGGTCA TCCGTTACAA CTCGCTGGAC
GAGCTTCAGG GAGTGCTCGC TCACATCCGC TGA
 
Protein sequence
MAVKKRGLGR GLDALLSSPT VSSLEEQAVK APPSELQHVP LDLIQRGKYQ PRRDMDPQAL 
EELAQSIKSQ GVMQPIVVRP IGDNRFEIIA GERRWRASQQ AGVETIPAMV RDVPDETAIA
MALIENIQRE DLNPIEEAMA LQRLQQEFQL TQQQVADAVG KSRVSVANLL RLIALPEAIK
TMLSHGDLEM GHARALLGLG EDRQVEGARH VVARGLTVRQ TEALVRQWLS GKAEAAEPVK
TDPDISRLEQ RLAERLGSAV QIRHGQKGKG QLVIRYNSLD ELQGVLAHIR