Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5129 |
Symbol | |
ID | 3370687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 6084379 |
End bp | 6085251 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655504 |
Product | ParB-like partition protein |
Protein accession | YP_238194 |
Protein GI | 66048353 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.968152 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGTCA AGAAACGAGG TCTCGGACGT GGGTTGGACG CACTTCTGAG CAGTCCAACC GTCAGTTCGC TGGAAGAACA GGCCGTCAAG GCCCCGCCAA GTGAGTTGCA GCATGTGCCG CTGGACCTGA TCCAGCGCGG CAAGTACCAG CCGCGCCGGG ACATGGACCC GCAGGCACTC GAAGAACTTG CGCAGTCGAT CAAGTCGCAG GGCGTGATGC AGCCGATCGT GGTGCGTCCT ATCGGTGACA ACCGCTTCGA GATCATTGCG GGCGAGCGTC GCTGGCGTGC CAGCCAGCAG GCGGGAGTCG AGACGATCCC GGCGATGGTC CGCGATGTGC CGGACGAAAC CGCGATTGCG ATGGCGCTGA TCGAGAACAT CCAGCGTGAG GACCTCAACC CGATCGAAGA GGCCATGGCA CTGCAGCGCC TGCAGCAGGA GTTTCAACTG ACCCAGCAGC AGGTGGCCGA TGCCGTCGGC AAGTCGCGAG TCAGTGTGGC CAACCTGTTA CGCCTGATTG CCTTGCCGGA GGCCATCAAG ACGATGCTGT CTCATGGCGA CCTGGAAATG GGTCATGCTC GCGCCTTGCT CGGGCTGGGT GAAGATCGGC AGGTCGAAGG TGCGCGACAC GTTGTCGCAC GCGGGCTTAC CGTGCGCCAG ACCGAAGCAC TGGTCAGGCA GTGGCTGAGC GGCAAGGCAG AGGCTGCCGA GCCGGTGAAG ACCGACCCGG ACATCAGCCG CCTGGAACAG CGCCTGGCCG AGCGTCTGGG CTCTGCAGTG CAGATTCGTC ACGGTCAGAA GGGCAAAGGG CAATTGGTCA TCCGTTACAA CTCGCTGGAC GAGCTTCAGG GAGTGCTCGC TCACATCCGC TGA
|
Protein sequence | MAVKKRGLGR GLDALLSSPT VSSLEEQAVK APPSELQHVP LDLIQRGKYQ PRRDMDPQAL EELAQSIKSQ GVMQPIVVRP IGDNRFEIIA GERRWRASQQ AGVETIPAMV RDVPDETAIA MALIENIQRE DLNPIEEAMA LQRLQQEFQL TQQQVADAVG KSRVSVANLL RLIALPEAIK TMLSHGDLEM GHARALLGLG EDRQVEGARH VVARGLTVRQ TEALVRQWLS GKAEAAEPVK TDPDISRLEQ RLAERLGSAV QIRHGQKGKG QLVIRYNSLD ELQGVLAHIR
|
| |