Gene Psyr_5125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5125 
Symbol 
ID3370683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6082015 
End bp6082485 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content55% 
IMG OID637655500 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_238190 
Protein GI66048349 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0727464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.577364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACATTA ATGCAACCCT GATTGGCCAG TCCGTTGCGT TCTTCATTTT TGTGCTGTTC 
TGCATGAAGT TCGTGTGGCC TCCGGTCATC GCGGCTTTGC ACGAACGTCA GAAGAAGATC
GCGGATGGAC TGGACGCTGC TTCCCGAGCA GCTCGCGACC TGGAGCTGGC CCAAGAAAAA
GCGGGTCAAC AACTGCGCGA AGCTAAAGCT CAAGCAGCCG AGATCATTGA GCAAGCCAAG
AAACGCGGTA CTCAGATTGT CGACGAAGCC CGTGAAACGG CACGCGTTGA AGCTGACCGT
GTGAAGGCTC AGGCTCAGGC CGAGATCGAG CAGGAACTGA ACGGTGTCAA AGACGCCTTG
CGCGCCCAGT TGGGTAGCCT GGCAGTCAAT GGCGCAGAGA AGATCCTGGG TGCCACAATC
GATCAAAACG CGCACGCGGA GCTGGTTAAC AAACTGGCTG CTGAAATTTA A
 
Protein sequence
MNINATLIGQ SVAFFIFVLF CMKFVWPPVI AALHERQKKI ADGLDAASRA ARDLELAQEK 
AGQQLREAKA QAAEIIEQAK KRGTQIVDEA RETARVEADR VKAQAQAEIE QELNGVKDAL
RAQLGSLAVN GAEKILGATI DQNAHAELVN KLAAEI