Gene Psyr_5045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5045 
Symbol 
ID3370603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5987048 
End bp5987590 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID637655420 
Producthypothetical protein 
Protein accessionYP_238110 
Protein GI66048269 
COG category[S] Function unknown 
COG ID[COG3495] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.110017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCT TCCTGTTGAT GACTCTTCTG CTGTTATCCG CGCTCTCCGG TCCCGCACTC 
GCCCAGTTGC CGGAAACCGA CTGGCTTGAG CTGATGCCCA AGTCCGATCA AAAAGCCCTC
GAAGCCATGC CCGAGATTGA CCACAATTCT CCGGAAGCCA TGGGCACGTT CGACAGCAAG
GGTGGGCTGA AGCAGAGCAA GGGTCTGCCA GCAGTCATGT ATTCGACCAA AACCGTCCCG
GCAATGAATG GCAAGACGAT TCGTCTCGGC GGCTACCCTG TGCCTCTGGA AACCGATGCC
AAGGGCCGCA GTACGCTGTT CTTCATCGTG CCTTACCCAG GCGCCTGCAT CCACGTTCCG
CCACCGCCGC CCAACCAGCT GGTGCTGGTG CGTTACCCCA AGGGTCTGAA ACTGGATGAT
ATCTACACAC CACTGTGGGT AGAAGGCACC CTGAAAATCG AGAAGGTCAG TAATGACCTT
GCCGATGCGG CGTATGCGAT GGACGCGTCA AAGGTCCGTG TGGTGGTTGA GTCGGACCTT
TGA
 
Protein sequence
MRRFLLMTLL LLSALSGPAL AQLPETDWLE LMPKSDQKAL EAMPEIDHNS PEAMGTFDSK 
GGLKQSKGLP AVMYSTKTVP AMNGKTIRLG GYPVPLETDA KGRSTLFFIV PYPGACIHVP
PPPPNQLVLV RYPKGLKLDD IYTPLWVEGT LKIEKVSNDL ADAAYAMDAS KVRVVVESDL