Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5034 |
Symbol | |
ID | 3370592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5973194 |
End bp | 5974534 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637655409 |
Product | CBS-domain containing protein |
Protein accession | YP_238099 |
Protein GI | 66048258 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.125258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCTT CCCCTAGTTT TAACCTGTCT TCACTCTTCG CCGATTTCGG CATGATTCTT TTTGCTTTGT TCCTGGTCCT GCTCAACGGC TTTTTCGTTG CGGCAGAGTT CGCCATGGTC AAACTGCGCT CGACCAAGGT TGAAGCCATT GCCGACAAGA ACGGCTGGCG CGGGCACATT CTGCGCAAGG TCCATGGCCA GCTGGACGCC TACCTTTCGG CCTGCCAGCT GGGGATCACC CTCGCCTCTC TGGGCCTGGG CTGGGTCGGT GAACCGGCCT TCGCGCACCT GCTGGAGCCG TTGCTCGCGG CGATGGGCGT GGACACTCCG GAATTGATCA AGGGCGTGTC GTTCTTTACC GCCTTCTTCA TCATTTCCTA TCTGCACATC GTCATCGGCG AGCTGGCCCC CAAATCCTGG GCGATCCGCA AACCGGAGCT GTTGTCGCTG TGGACAGCGG CGCCGTTGTA CTTCTTCTAC TGGTTGATGT ACCCGGCCAT CTACCTGCTC AACGCCAGCG CCAACGCCAT TTTGCGCATC GCCGGCCAGG GTGAGCCCGG CCCGCACCAT GAACACAGCT ACAGCCGCGA CGAATTGAAA CTGATCCTGC ACTCCAGCCG TGGCCAGGAC CCCAGCGATC AGGGCATGCG TGTGCTGGCG TCGGCTGTGG AAATGGGCGA GCTGGAAGTG GTCGACTGGG CCAACTCCCG CGAAGACATG GTGTCACTGG ACTTCAATGC GCCGCTCAAG GAAATCCTTG CCTTGTTCCG CCGTCACAAA TTCAGCCGTT ATCCGCTGTA TGACGCTGAA CGTGGCGAGT TCGTCGGCCT GCTGCACATC AAGGACCTGC TGCTGGAACT GGCAGCGCTG GACCATATTC CGGAGTCGTT CAACCTGGCC GAGCTGACCC GCCCGCTGGA ACGTGTTTCC CGGCACATGC CGCTGTCGCA GTTGCTCGAG CAGTTCCGCA AGGGTGGTGC GCACTTCGCC GTGGTGGAAG AAGCCGACGG CAAGATCGTG GGCTACCTGA CCATGGAAGA CGTGCTCGAA GTGCTGGTGG GCGACATCCA GGACGAACAC CGCAAGGTAG AGCGCGGCAT TCTCGCCTAT CAGCCCGGCA AACTGCTGGT ACGCGGTGAC ACGCCATTGT TCAAGATCGA GCGCCTGCTG GGCGTCGACC TGGATCACAT CGAAGCCGAG ACACTGGCCG GTCTGATCTA CGACACACTC AAGCGCGTGC CGGAAGAAGA GGAACAACTG GAAGTCGAAG GCCTGCGCAT CATCATCAAG AAGATGAAAG GCCCGAAAAT CGTCCTGGCC AAGGTGCTGA AGCTGGACTG A
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Protein sequence | MDPSPSFNLS SLFADFGMIL FALFLVLLNG FFVAAEFAMV KLRSTKVEAI ADKNGWRGHI LRKVHGQLDA YLSACQLGIT LASLGLGWVG EPAFAHLLEP LLAAMGVDTP ELIKGVSFFT AFFIISYLHI VIGELAPKSW AIRKPELLSL WTAAPLYFFY WLMYPAIYLL NASANAILRI AGQGEPGPHH EHSYSRDELK LILHSSRGQD PSDQGMRVLA SAVEMGELEV VDWANSREDM VSLDFNAPLK EILALFRRHK FSRYPLYDAE RGEFVGLLHI KDLLLELAAL DHIPESFNLA ELTRPLERVS RHMPLSQLLE QFRKGGAHFA VVEEADGKIV GYLTMEDVLE VLVGDIQDEH RKVERGILAY QPGKLLVRGD TPLFKIERLL GVDLDHIEAE TLAGLIYDTL KRVPEEEEQL EVEGLRIIIK KMKGPKIVLA KVLKLD
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