| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4997 |
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| Symbol | |
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| ID | 3370549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5926344 |
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| End bp | 5928011 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637655366 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_238062 |
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| Protein GI | 66048221 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCGCT TTCAAGATTG TTCGGGTAAA AGCACTTATT ACCGCTACGA CGAGCGCCAC
CACCTGGTGG CCGTCACCGA TGCCCTGAAC AACACCACCA CGCTGGAGCG CAAACCCGAC
GGCGAAGTGC TGCGCATCAA CCATCCGGAT GGCACCAGCG AGACCTTTAC CTACAACGAA
CTGGGCCAGG TCCTGACCCA CACCGATGGC AAAGGCCAGA CCACCCAACT GCTGCGCAAC
GGCCGTGGCC TGCCTAAATG GCGACAGGAT GCCAAAGGGC AGACCATCAC CTACGAATAC
GACAAGGCCA TTCGCCTCGT CGCCCTGACC AACGAAAACG ATGCGACCTA CAACTTTGCC
TACGACGACG CAGACCGTCT GATCGAAGAA AAACGCATCG ATAACCTCAC CCGCCGTTTC
AGCTACAACC TCGGCGGGCA CCTGACACAG GTCGAGGAAA TCGGCTACGG CGAGAAAGGC
GAACAGCCAC GGCGCAGCAC CCATCTGGAG CGCGACCCGA TTGGTCGCCT GCTGGCCAAG
CTAAACGACG ACGCGCGCCA GGACTACGCC TACGACGACG GCGACCGACT TCTGTCAATC
GAGCGCAAGC CGACGGACAC CGGCAGAAAA CTGGGCATCA CCGCTGAAAA GATCGACTTC
GCCTACGACC TGCTCGGCCG ACTCGTCAAA GAAACCACTC CTCAGGGCGC GCTGGCCTAC
GAGTACGATC CGCTCAGCAA CCTGACCACT CTAACCCTGC CTACCGGTCA ACACCTGAAC
CACCTGTACT ACGGCAGCGG TCACCTGCAC CAGTTGAACC TCGATGGCCA GTTGATCAGC
GACATGGAAC GCGACGATCT CCATCGCGAG ATCTATCGCA CCCAAGGCAA GCTCACCAGT
TGCTTCGGTT ACGACAGCAT GGGCCGCAAA GCGTGGCAGT ACGCCACAAC TCTGCCCGCG
GAAAAACTGT CACAAATCCA GAACCCGCTC ATAAAGCCAG AGCGTTACGT CGAACACGCC
TACAACCCCA TTCACCGCCG CTACGAATAC GACCCGGCTG GCGAATTGAG CCGCACCCTC
GACAAGCTGC GCGGCGAAAC CCAGTACGAA TACGAAGCCA ACGGCCAGTT GCTGGCACGC
AACACCGGCC GAGTGGTCGA TGGCGAAGAG TTCCGCTACG ACGCTGCGGC CAACCGCCTC
AACTTCAACA CCAGTCGTTT CGATCACGTC AAAGACAACC GCCTCAAACA GTGGGCGAAC
CACGAATACA AATACGACGT CTGGGGCAAC CTGATCGAAA AAGTCGTCGG CATCGTGCGC
TGGCAGACCT TCACCTACGA CTGCGAAAAC CGTCTGGTCA AAACCGAGAC CATAGCTGAT
ACGCAGGTGG AAAGCACCAG CAGCTATCAG TACGACAGTC TGGGCCGAAG AGTCGCCAAA
CAGTCCGAGA TCAAAGGCCA CACCGACCAC AAACGTTTCC TCTGGCAAGG CCTGCGGATG
CTGCGTGAGG AAAGTCCGGG ACAGAGCAGC CTGTACCTCT ACGAGCCCGG CAGCTATGCG
CCGCTGGCCC GCGTGGATGA GAAAGAGGGC GAGGTAGAGA ACAGGGTCTA CTACTTCCAC
ACCGACCAGC ACCTAACCAT CCGTATTACG ACATCGGCAG CCGTCTGA
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| Protein sequence | MQRFQDCSGK STYYRYDERH HLVAVTDALN NTTTLERKPD GEVLRINHPD GTSETFTYNE
LGQVLTHTDG KGQTTQLLRN GRGLPKWRQD AKGQTITYEY DKAIRLVALT NENDATYNFA
YDDADRLIEE KRIDNLTRRF SYNLGGHLTQ VEEIGYGEKG EQPRRSTHLE RDPIGRLLAK
LNDDARQDYA YDDGDRLLSI ERKPTDTGRK LGITAEKIDF AYDLLGRLVK ETTPQGALAY
EYDPLSNLTT LTLPTGQHLN HLYYGSGHLH QLNLDGQLIS DMERDDLHRE IYRTQGKLTS
CFGYDSMGRK AWQYATTLPA EKLSQIQNPL IKPERYVEHA YNPIHRRYEY DPAGELSRTL
DKLRGETQYE YEANGQLLAR NTGRVVDGEE FRYDAAANRL NFNTSRFDHV KDNRLKQWAN
HEYKYDVWGN LIEKVVGIVR WQTFTYDCEN RLVKTETIAD TQVESTSSYQ YDSLGRRVAK
QSEIKGHTDH KRFLWQGLRM LREESPGQSS LYLYEPGSYA PLARVDEKEG EVENRVYYFH
TDQHLTIRIT TSAAV
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