| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4948 |
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| Symbol | |
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| ID | 3370500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5864093 |
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| End bp | 5866042 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637655317 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_238013 |
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| Protein GI | 66048172 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGAC CGCGAATGCA CCAGCGTCTC GAACAGGTAT TCGGCTACAC ACAGTTCCGG
CCGGGGCAGG AGGCTGCCAT CAGTGCGGTA CTGGCCGGAC GCTCGGCTGC GGCGATCTTT
CCGACTGGCT CGGGCAAGTC GCTATGTTAC CAATTGCCTG CTTTGATGTT GCCGCATTTG
ACGCTGGTGG TGTCGCCGTT GCTGGCGCTG ATTCAGGATC AGCTTGCCTT CCTGCACCGC
CATGGCATAT CGGCGGCGAG CATTGATTCG GCGCAAAGCC GCGACGAGAT CGCTGACGTG
ATGGCACGCG CACGTTCCGG CGAGCTGAAG ATTCTGATGA TCTCGGTCGA GCGCCTGAAG
AACGAGCGCT TCCGCAATTT CATCGCTCAA GTGCCGATTT CCCTGCTGGT GGTCGACGAA
GCGCACTGCA TTTCGGAGTG GGGGCATAAC TTCCGCCCCG ACTACCTGAA GCTGCCGGAC
TACCAGCGCG AATTCAATAT TCCCCAGACA TTGCTGCTGA CCGCCACGGC GACCCCGCAA
GTCATCATCG ACATGCAGGA CAAATTCGCC ATCGCCCCCG AGGATGTGAT CACCACCGGT
TTCTACCGCG CCAACCTGCA CCTGTGGGTC AAGCCGGTCA GCGGCCGTGA CAAACGACGC
CGGCTGGTAG AGTGGCTCAA CGAGCGTCGC GGGCAACCGA CCATCGTTTA CGTGACCCTG
CAAAAGACAG CCGAACATAT CGCCGCGCAC CTGGAACAGA ATGGCCTGCC CGCCAGCGCC
TACCATGCCG GGCTGCCCAA CGATCAGCGC GAGTCGATCC AGAAGCAGTT CATGGGCGGC
CATTTGAACT GCATCGTGGC AACCATCGCG TTCGGGATGG GCATCGACAA GAGCGATATC
CGCAATGTGG TGCATTTCGA CCTGCCGAAA TCCATCGAGA ACTACAGCCA GGAAATCGGT
CGGGCAGGGC GTGATGGTGC TGCTTCGGAT TGTCTGGTGC TGGCTAACCG CGACAGCCTC
AACGTGCTGG AGAACTTCGT GTATGGCGAT ACGCCCGAGC GCGAGGGGAT TGCCCGTGTG
CTGGAAGACT TGCTCGGGGC GCGCCATGAC GGGCAGTGGG AGTTTCTGCT GGGGCCGCTC
GCCGACCTCA GCAACATTCG TCAATTGCCG CTGAAGACCC TGCTGGTGCA ACTGGAGCTG
CGCGGGATCA TTGCGCCGCG CTACGCGTAT TTTGCCGAGT ACCGCTTCAA GTTTCTGCTT
CAGCCGCAAG ACCTGATGGC GCGTTTCGAA GGAGAGCGAC GCGAGTTCGT TCAGGCCCTG
ATTGACACCT CAAACCGGGC ACGCACCTGG GCCACCGTCG ATTTCGAGGC GATGTACCAG
CAATATGGCG CCGAGCGCGG GCGGGTGGTC AAGGCGCTGG ATTACTTTCA GGAAAAAGGC
TGGATCGAGC TTGAAAGCAA ACAGATGACC GAGGTCTACA GCCTGTTGCG CAGCGACTTT
GATGCTCAGG CCTTGAGCAT CGAATTGCAC GATTATTTCG CTCATCACGA AGCCACTGAA
GTGGCGCGCA TTCACACCAT GCTGGACGTG TTCGCCAGTG ATCAGTGCCT GACCCATCGC
CTGGCGCGGT ACTTTGGTGA CCACAATGCG CCTGAGCGCT GTGGGCATTG TTCAGTGTGC
CTGGGCGAAG TCGCCCACCT GCCCGAACCA CCCGCGCTGG AGCCCTTGGC AAATCGGGAC
TTTCAGCAAC TGTGCAGCGA GTTTATCCAC AAGCACCAGA ACTACACCGG CCAGCCGCCC
AGCGCCGACT GCCTGACGCG TTTTCTATGC GGTATCAGCG TGCCGCTGTT CACCAGGCTC
AAAGCCCGCG CCACCACCGG GTTTGCGGTG CTGGAGGACT ATCCGTACGC ACAGGTCAGG
ACGTGGGTGC AGGCGATGGC TGGCAACTGA
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| Protein sequence | MDGPRMHQRL EQVFGYTQFR PGQEAAISAV LAGRSAAAIF PTGSGKSLCY QLPALMLPHL
TLVVSPLLAL IQDQLAFLHR HGISAASIDS AQSRDEIADV MARARSGELK ILMISVERLK
NERFRNFIAQ VPISLLVVDE AHCISEWGHN FRPDYLKLPD YQREFNIPQT LLLTATATPQ
VIIDMQDKFA IAPEDVITTG FYRANLHLWV KPVSGRDKRR RLVEWLNERR GQPTIVYVTL
QKTAEHIAAH LEQNGLPASA YHAGLPNDQR ESIQKQFMGG HLNCIVATIA FGMGIDKSDI
RNVVHFDLPK SIENYSQEIG RAGRDGAASD CLVLANRDSL NVLENFVYGD TPEREGIARV
LEDLLGARHD GQWEFLLGPL ADLSNIRQLP LKTLLVQLEL RGIIAPRYAY FAEYRFKFLL
QPQDLMARFE GERREFVQAL IDTSNRARTW ATVDFEAMYQ QYGAERGRVV KALDYFQEKG
WIELESKQMT EVYSLLRSDF DAQALSIELH DYFAHHEATE VARIHTMLDV FASDQCLTHR
LARYFGDHNA PERCGHCSVC LGEVAHLPEP PALEPLANRD FQQLCSEFIH KHQNYTGQPP
SADCLTRFLC GISVPLFTRL KARATTGFAV LEDYPYAQVR TWVQAMAGN
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