Gene Psyr_4940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4940 
Symbol 
ID3370492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5856355 
End bp5857197 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID637655309 
Product3(2),5 -bisphosphate nucleotidase 
Protein accessionYP_238005 
Protein GI66048164 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CGTTGCACAA CCTGCCACAT CCGCTGCTCG CCCCGGTGAT TGAACTCACG 
CGACTGGCGG GCGAAGTGAT CCTGCCGTTC TGGCGCGCCA ATGTCACCGT GACCACCAAG
ACTGACGACT CGCCGGTGAC CGCCGCTGAT CTGGCCGCCC ATCAGGTGCT GGTCGAGGGC
CTGCAGGCGC TTGATCCGGA CATTCATGTG CTCTCTGAAG AGGACGCTGA CATCCCCTTC
CGCGAGCGGG CAGGCTGGGA GCGCTGGTGG CTGGTCGATC CGCTGGACGG CACCAAGGAG
TTCATCTCCG GCAGCGAAGA GTTCACCGTC AATGTCGCAC TGATCGAACG CGGCCGCGTG
GTATTCGGTG TGGTCTCGAT GCCCACCAAC AACCGTTGTT ACTTCGGCGG TGCCGGGCTG
GGTGCCTGGC GCAGCGATGG CGTCGGCCAC CTCCAGCCGA TCGCAGTGCG CAATCATCTT
GCTGAAGGGC AGACCTTTAC GGTGGTCGCC AGCCGCCGCC ATTCCAGCCC GGAGCAGGAA
CATTTGCTCG CGGGCCTGTC GAACGGGCTG GGTCATTTGC AACTGACCAA CATCGGCAGC
TCACTGAAAT TCTGCCTGCT GGCCGAAGGC GCCGCCGACT GCTACCCGCG CCTGGCCCCG
ACCTCGCAAT GGGACACCGC AGCGGCGCAG GGCGTGCTTG AAGGTGCAGG AGGCGAAGTG
TTGCAACTGG ACGGCCAGCC GTTCAGCTAC CCGGCCCGCG AATCACTGCT CAACCCGTTC
TTCCTGGCCC TGCCGGCCAA CGCCGAATGG CGCGACAAAC TGCTGGTGCT GGCGCAGTCC
TGA
 
Protein sequence
MTDSLHNLPH PLLAPVIELT RLAGEVILPF WRANVTVTTK TDDSPVTAAD LAAHQVLVEG 
LQALDPDIHV LSEEDADIPF RERAGWERWW LVDPLDGTKE FISGSEEFTV NVALIERGRV
VFGVVSMPTN NRCYFGGAGL GAWRSDGVGH LQPIAVRNHL AEGQTFTVVA SRRHSSPEQE
HLLAGLSNGL GHLQLTNIGS SLKFCLLAEG AADCYPRLAP TSQWDTAAAQ GVLEGAGGEV
LQLDGQPFSY PARESLLNPF FLALPANAEW RDKLLVLAQS