Gene Psyr_4898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4898 
Symbol 
ID3370448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5809043 
End bp5810242 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content61% 
IMG OID637655265 
Productaromatic amino acid aminotransferase 
Protein accessionYP_237963 
Protein GI66048122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCCC ACGTGGAGTC ATACGCCGGT GATCCGATCC TTTCGCTGAT GGAGACCTTT 
GGCAAGGACC CGCGTGCGGA CAAGGTCAAT CTGAGCATCG GCCTGTATTA CGACGCACAG
GGCCGCATCC CGCAGTTGGC ATGCGTAGCA ACAGCGCAAC AGCAACTGGC CGAAGGCGAA
CAGGCGGCGT CCGTGTACCT GCCGATGGAA GGCCTGGCGG CGTATCGGCA GGCGGTGCAA
ACCCTGTTGT TCGGCGCCGA TCACCCGCTG GTTCAGGCAG GCCGTGTCGC CACCATTCAA
ACCGTGGGCG GCTCGGGCGC GCTGAAGATA GGTGCCGATT TCCTCAAATA TGCGTTTCCG
GACTCGCAGG TCTGGGTGAG TGACCCGACC TGGGAAAACC ATAACGCGCT GTTCGGCGGG
GCGGGCTTCA AGGTCAATGC GTATCCGTAC TTTGATGCCC AGACCGGCGG CGTCAGGTTC
GAGACCATGC TCGACACGGT GCAGGGGCTG CCGGCGCAGA GCATCCTCCT GCTGCACCCG
TGCTGCCATA ACCCGACCGG TGCCGATCTG ACGGTGGCGC AATGGGACCG CCTGATCGAA
GTGATCAAGG ATCGTCAGCT CATCGCCTTC CTGGATATCG CCTACCAGGG CTTCGGCAAA
GGCATCGACG AAGACGTCTA TGCCATCCGG GCGATGGCCA ACGCAGGTAT CACCACGCTG
GTCAGTAACT CGTTCTCGAA AATCTTCTCG CTGTATGGCG AGCGGGTAGG CGGGCTGTCG
GTGGTCTGTG AGGACACGAC GTCGGCGGCC AATGTGTTCG GCCAGCTCAA GGCAACCGTG
CGCCGCAACT ACTCCAGCCC GCCTGCACAT GGCGCGTTTC TGGTCTCGAA AGTGCTCAAC
ACGCCGCACT TGCGCGAGCA GTGGCTGGGT GAAGTCGAGG CCATGCGCCT GCGTATCATC
GACATGCGCA CGCGGCTGGT CGAGGTGCTG GCGCAGAAGG TCTCCGGCCA CGATTTCAGC
TTTATCCTCA GGCAGAACGG GATGTTCAGC TACACCGGTC TGACCCCGCA GCAGGTCGAC
GAACTGAAAG ATGTTCACGG CATTTACATG CTGCGCAGTG GCCGGGTGTG CATGGCAGGT
TTGAATGAAG GGAATATCGA CAAGGTATGT AACGCAATCG CGAGCCTCTT CGCCCGTTAA
 
Protein sequence
MLAHVESYAG DPILSLMETF GKDPRADKVN LSIGLYYDAQ GRIPQLACVA TAQQQLAEGE 
QAASVYLPME GLAAYRQAVQ TLLFGADHPL VQAGRVATIQ TVGGSGALKI GADFLKYAFP
DSQVWVSDPT WENHNALFGG AGFKVNAYPY FDAQTGGVRF ETMLDTVQGL PAQSILLLHP
CCHNPTGADL TVAQWDRLIE VIKDRQLIAF LDIAYQGFGK GIDEDVYAIR AMANAGITTL
VSNSFSKIFS LYGERVGGLS VVCEDTTSAA NVFGQLKATV RRNYSSPPAH GAFLVSKVLN
TPHLREQWLG EVEAMRLRII DMRTRLVEVL AQKVSGHDFS FILRQNGMFS YTGLTPQQVD
ELKDVHGIYM LRSGRVCMAG LNEGNIDKVC NAIASLFAR