Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4898 |
Symbol | |
ID | 3370448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5809043 |
End bp | 5810242 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637655265 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_237963 |
Protein GI | 66048122 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAGCCC ACGTGGAGTC ATACGCCGGT GATCCGATCC TTTCGCTGAT GGAGACCTTT GGCAAGGACC CGCGTGCGGA CAAGGTCAAT CTGAGCATCG GCCTGTATTA CGACGCACAG GGCCGCATCC CGCAGTTGGC ATGCGTAGCA ACAGCGCAAC AGCAACTGGC CGAAGGCGAA CAGGCGGCGT CCGTGTACCT GCCGATGGAA GGCCTGGCGG CGTATCGGCA GGCGGTGCAA ACCCTGTTGT TCGGCGCCGA TCACCCGCTG GTTCAGGCAG GCCGTGTCGC CACCATTCAA ACCGTGGGCG GCTCGGGCGC GCTGAAGATA GGTGCCGATT TCCTCAAATA TGCGTTTCCG GACTCGCAGG TCTGGGTGAG TGACCCGACC TGGGAAAACC ATAACGCGCT GTTCGGCGGG GCGGGCTTCA AGGTCAATGC GTATCCGTAC TTTGATGCCC AGACCGGCGG CGTCAGGTTC GAGACCATGC TCGACACGGT GCAGGGGCTG CCGGCGCAGA GCATCCTCCT GCTGCACCCG TGCTGCCATA ACCCGACCGG TGCCGATCTG ACGGTGGCGC AATGGGACCG CCTGATCGAA GTGATCAAGG ATCGTCAGCT CATCGCCTTC CTGGATATCG CCTACCAGGG CTTCGGCAAA GGCATCGACG AAGACGTCTA TGCCATCCGG GCGATGGCCA ACGCAGGTAT CACCACGCTG GTCAGTAACT CGTTCTCGAA AATCTTCTCG CTGTATGGCG AGCGGGTAGG CGGGCTGTCG GTGGTCTGTG AGGACACGAC GTCGGCGGCC AATGTGTTCG GCCAGCTCAA GGCAACCGTG CGCCGCAACT ACTCCAGCCC GCCTGCACAT GGCGCGTTTC TGGTCTCGAA AGTGCTCAAC ACGCCGCACT TGCGCGAGCA GTGGCTGGGT GAAGTCGAGG CCATGCGCCT GCGTATCATC GACATGCGCA CGCGGCTGGT CGAGGTGCTG GCGCAGAAGG TCTCCGGCCA CGATTTCAGC TTTATCCTCA GGCAGAACGG GATGTTCAGC TACACCGGTC TGACCCCGCA GCAGGTCGAC GAACTGAAAG ATGTTCACGG CATTTACATG CTGCGCAGTG GCCGGGTGTG CATGGCAGGT TTGAATGAAG GGAATATCGA CAAGGTATGT AACGCAATCG CGAGCCTCTT CGCCCGTTAA
|
Protein sequence | MLAHVESYAG DPILSLMETF GKDPRADKVN LSIGLYYDAQ GRIPQLACVA TAQQQLAEGE QAASVYLPME GLAAYRQAVQ TLLFGADHPL VQAGRVATIQ TVGGSGALKI GADFLKYAFP DSQVWVSDPT WENHNALFGG AGFKVNAYPY FDAQTGGVRF ETMLDTVQGL PAQSILLLHP CCHNPTGADL TVAQWDRLIE VIKDRQLIAF LDIAYQGFGK GIDEDVYAIR AMANAGITTL VSNSFSKIFS LYGERVGGLS VVCEDTTSAA NVFGQLKATV RRNYSSPPAH GAFLVSKVLN TPHLREQWLG EVEAMRLRII DMRTRLVEVL AQKVSGHDFS FILRQNGMFS YTGLTPQQVD ELKDVHGIYM LRSGRVCMAG LNEGNIDKVC NAIASLFAR
|
| |