Gene Psyr_4881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4881 
Symbol 
ID3370431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5792437 
End bp5792892 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content58% 
IMG OID637655248 
ProductRNA methyltransferase TrmH, group 2 
Protein accessionYP_237946 
Protein GI66048105 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCACG TCATCCTTTT TCAACCAGAA ATTCCGCCGA ATACCGGCAA TGTCATCAGG 
CTATGCGCCA ACAGTGGCTG CACCCTGCAT TTGATCGAAC CCTTGGGTTT CGAGCTGGAC
GACAAGCGCC TGCGCCGTGC CGGGCTCGAT TATCACGAGT ATGCCACGCT GCAGACACAT
GCTGACCTGG CAAGCTGTCT GGAGAAGATC GGCAACCCGA GGGTGTTCGC CTTCACCACC
AAAGGCTCTC GGCCTTTTCA TGATGCGAGC TTCGAGCCAG GCGATGCCTT TCTGTTCGGT
CCGGAGAGCC GTGGCCTGCC CGCCGATATT CTTGACTCGC TGAGCAGCGA GCATCGCCTG
CGACTGCCCA TGCGCGAAGG CTGCCGCAGC CTTAATCTGT CCAACACGGT GGCCGTGGCT
GTCTATGAAG CATGGCGTCA GCATGGATTT GCCTAG
 
Protein sequence
MFHVILFQPE IPPNTGNVIR LCANSGCTLH LIEPLGFELD DKRLRRAGLD YHEYATLQTH 
ADLASCLEKI GNPRVFAFTT KGSRPFHDAS FEPGDAFLFG PESRGLPADI LDSLSSEHRL
RLPMREGCRS LNLSNTVAVA VYEAWRQHGF A