Gene Psyr_4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4877 
Symbol 
ID3370427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5788822 
End bp5789460 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content56% 
IMG OID637655244 
Productperoxidase 
Protein accessionYP_237942 
Protein GI66048101 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.885155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGC GACTTGGCGA CATCGCCCCT GATTTCGAAC AGGAATCCAG TGAGGGGCGT 
ATACGTTTTC ATGAATGGCT CGGCGACAGC TGGGGTGTGT TGTTTTCTCA TCCGGCTGAC
TTCACGCCGG TGTGCACCAC AGAGCTGGGC TTCACTGCCA AATTAAAAGA CGAGTTCGCC
AAGCGCGGCG TGAAAGCCAT TGCGCTGTCG GTGGATCCGG TCGATTCGCA CATCAAGTGG
ATCGACGACA TCAACACCAC GCAAAACACC CTGGTCAACT TCCCGATTCT GGCCGACGCT
GACCGCAAGG TTTCCGACCT GTACGACCTG ATTCACCCCA ATGCCAACGA CACACTGACT
GTGCGCTCGC TGTTCGTGAT CGATCCGAAC AAGAAGGTGC GTCTGACCAT TACCTATCCG
GCCAGCACCG GGCGTAACTT CCACGAGATT CTGCGCGTTA TCGACTCCCT GCAATTGACC
GACAACTACA AGGTCGCCAC GCCCGCCAAC TGGGTGGACG GTGATGACGT AGTGATCGTG
CCGTCGATCA AGGACGAAGC CGAGATCAAA CAACGCTTTC CCAAGGGCTA CAAGGCAGTC
ACCCCTTATC TGCGCCTGAC ACCACAGCCA AACCGCTGA
 
Protein sequence
MTLRLGDIAP DFEQESSEGR IRFHEWLGDS WGVLFSHPAD FTPVCTTELG FTAKLKDEFA 
KRGVKAIALS VDPVDSHIKW IDDINTTQNT LVNFPILADA DRKVSDLYDL IHPNANDTLT
VRSLFVIDPN KKVRLTITYP ASTGRNFHEI LRVIDSLQLT DNYKVATPAN WVDGDDVVIV
PSIKDEAEIK QRFPKGYKAV TPYLRLTPQP NR