Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4877 |
Symbol | |
ID | 3370427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5788822 |
End bp | 5789460 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637655244 |
Product | peroxidase |
Protein accession | YP_237942 |
Protein GI | 66048101 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.885155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGC GACTTGGCGA CATCGCCCCT GATTTCGAAC AGGAATCCAG TGAGGGGCGT ATACGTTTTC ATGAATGGCT CGGCGACAGC TGGGGTGTGT TGTTTTCTCA TCCGGCTGAC TTCACGCCGG TGTGCACCAC AGAGCTGGGC TTCACTGCCA AATTAAAAGA CGAGTTCGCC AAGCGCGGCG TGAAAGCCAT TGCGCTGTCG GTGGATCCGG TCGATTCGCA CATCAAGTGG ATCGACGACA TCAACACCAC GCAAAACACC CTGGTCAACT TCCCGATTCT GGCCGACGCT GACCGCAAGG TTTCCGACCT GTACGACCTG ATTCACCCCA ATGCCAACGA CACACTGACT GTGCGCTCGC TGTTCGTGAT CGATCCGAAC AAGAAGGTGC GTCTGACCAT TACCTATCCG GCCAGCACCG GGCGTAACTT CCACGAGATT CTGCGCGTTA TCGACTCCCT GCAATTGACC GACAACTACA AGGTCGCCAC GCCCGCCAAC TGGGTGGACG GTGATGACGT AGTGATCGTG CCGTCGATCA AGGACGAAGC CGAGATCAAA CAACGCTTTC CCAAGGGCTA CAAGGCAGTC ACCCCTTATC TGCGCCTGAC ACCACAGCCA AACCGCTGA
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Protein sequence | MTLRLGDIAP DFEQESSEGR IRFHEWLGDS WGVLFSHPAD FTPVCTTELG FTAKLKDEFA KRGVKAIALS VDPVDSHIKW IDDINTTQNT LVNFPILADA DRKVSDLYDL IHPNANDTLT VRSLFVIDPN KKVRLTITYP ASTGRNFHEI LRVIDSLQLT DNYKVATPAN WVDGDDVVIV PSIKDEAEIK QRFPKGYKAV TPYLRLTPQP NR
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