Gene Psyr_4868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4868 
Symbol 
ID3370418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5778347 
End bp5779723 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content59% 
IMG OID637655235 
Productglutamate--ammonia ligase 
Protein accessionYP_237933 
Protein GI66048092 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTAC CCCCGCGTGC CGTTCAGCTT AACGAAGCGA ACGCGTTCCT TAAGGAACAT 
CCTGAGGTTC TGTACGTTGA CCTTCTGATT GCAGATATGA ATGGTGTGGT GCGTGGCAAA
CGCATCGAAC GCACCAGCCT CCATAAGGTT TACGAGAAGG GCATCAACCT GCCTGCCTCT
TTATTTGCTC TGGATATCAA TGGCTCCACG GTGGAGAGCA CCGGTCTGGG CCTGGACATC
GGTGATGCTG ACCGAATCTG TTATCCCATC CCCGACACCC TGTGCAACGA GCCATGGCAA
AAGCGCCCTA CCGCGCAATT GCTGATGACC ATGCACGAAC TCGAAGGCGA TCCGTTTTTC
GCCGACCCGC GTGAAGTATT GCGCCAGGTC GTCGCCAAAT TCGACGAAAT GGGCCTGACC
ATCTGCGCCG CGTTCGAGCT GGAGTTCTAC CTGATCGATC AGGAGAACGT GAACGGTCGC
CCACAACCGC CCCGCTCGCC GATCTCCGGC AAACGCCCGC ATTCGACACA GGTCTACCTG
ATCGACGACC TCGACGAATA CGTCGACTGC CTTCAGGACA TCCTCGAAGG TGCGAAGGAA
CAAGGCATTC CTGCCGACGC CATCGTCAAG GAAAGCGCCC CGGCCCAGTT CGAAGTCAAC
CTGCATCACG TCGCCGACGC GATCAAGGCG TGCGATTACG CGGTATTGCT CAAGCGCCTG
ATCAAGAACA TCGCCTACGA TCACGAGATG GACACGACCT TCATGGCCAA GCCCTATCCG
GGTCAGGCGG GTAATGGTCT GCACGTTCAT ATTTCGATTC TGGATCGCGA CGGCAAGAAC
ATCTTCACCA GCGAGGATCC CGAGCAGAAC GCCGCATTGC GTCACGCAAT CGGCGGTGTG
CTCGAGACCC TGCCGGCACA AATGGCCTTC CTGTGCCCGA ACGTCAACTC GTACCGCCGG
TTCGGTGCGC AGTTCTATGT GCCCAACTCA CCGACCTGGG GCCTGGATAA CCGTACGGTC
GCCGTTCGCG TACCGACCGG CACCGCCGAT GCGGTACGTA TCGAACACCG CGTTGCCGGC
GCCGACGCCA ACCCGTATCT GGTGATGGCT TCGGTCCTGG CGGGCGTGCA CCACGGCCTG
GTCAACAAGG TCGAGCCTGG CGCTCCGGTC GAAGGCAACT CCTACGAGCA ACACGAACAA
AGCCTGCCGA ACAACCTGCG CGACGCATTG CGCGAGCTGG ACGACAACCC GGTGATGGCC
AAGTACATCG ACCCGAAATA CATCGACATT TTTGTCGCCT GTAAAGAGAG CGAGCTGGAA
GAGTTCGAAC ACTCCATCTC CGACCTCGAG TACAACTGGT ACCTGCATAC GGTCTGA
 
Protein sequence
MSVPPRAVQL NEANAFLKEH PEVLYVDLLI ADMNGVVRGK RIERTSLHKV YEKGINLPAS 
LFALDINGST VESTGLGLDI GDADRICYPI PDTLCNEPWQ KRPTAQLLMT MHELEGDPFF
ADPREVLRQV VAKFDEMGLT ICAAFELEFY LIDQENVNGR PQPPRSPISG KRPHSTQVYL
IDDLDEYVDC LQDILEGAKE QGIPADAIVK ESAPAQFEVN LHHVADAIKA CDYAVLLKRL
IKNIAYDHEM DTTFMAKPYP GQAGNGLHVH ISILDRDGKN IFTSEDPEQN AALRHAIGGV
LETLPAQMAF LCPNVNSYRR FGAQFYVPNS PTWGLDNRTV AVRVPTGTAD AVRIEHRVAG
ADANPYLVMA SVLAGVHHGL VNKVEPGAPV EGNSYEQHEQ SLPNNLRDAL RELDDNPVMA
KYIDPKYIDI FVACKESELE EFEHSISDLE YNWYLHTV