| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4854 |
|---|
| Symbol | |
|---|
| ID | 3370404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5761281 |
|---|
| End bp | 5761982 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637655221 |
|---|
| Product | 2OG-Fe(II) oxygenase family protein |
|---|
| Protein accession | YP_237919 |
|---|
| Protein GI | 66048078 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3751] Predicted proline hydroxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTC GCGCGCGTGA TACCGCCTGT ATAAGCCTCT GTCCGATTTC AGAGCTTATG
GATACTATGC ACGCCATGCG CATACCCTCT GACCACCCAC TGCTGTTGCG AATCGTCGAC
GATCTGGCCG CTAACGGCTG GTCGCAGCAG AATATTTTCC TGCCCGAAGC TCTGACTCTG
GAACTTGAGC AAGAGTGCCG CAAACGTGCA GCGGAAGGTG AGCTCGAGCC TGCTGCGATT
GGCAAGGGGC CGGCACTGGA AATACGCGAG GGTATTCGCG GTGACCGCAT TCAGTGGCTT
GAACCGGGGC AGGTGCAGTG CTGCGATCGC TATCTTGAGC TGATGGACAG TTTGCGTCAG
GCGCTCAATC GCGGCCTTTT CCTCGGGCTG GAAGATTACG AAAGCCATTT CGCGCTGTAT
CCGCCGGGTG CCCGCTACCT CAGGCATGTG GATCGATTCC GCGATGACGA CAGGCGCATG
GTGTCGGCGG TGCTCTACCT CAACAGCGCA TGGCTACCCG AGCACGGCGG TCAGTTGCGC
ATGTACCTCA AGGACGAGGT GGCTTACGAC GTTCAGCCTG CGGGCGGCTG CCTGGTGGTC
TTTCTGTCCG GCGAAATTCC CCACGAAGTC ATGCCCGCCA GTCGTGATCG ACTGTCACTG
ACGGGGTGGT TCAGACGCCG GGGCAACGAG CTGTTCCAGT GA
|
|---|
| Protein sequence | MKSRARDTAC ISLCPISELM DTMHAMRIPS DHPLLLRIVD DLAANGWSQQ NIFLPEALTL
ELEQECRKRA AEGELEPAAI GKGPALEIRE GIRGDRIQWL EPGQVQCCDR YLELMDSLRQ
ALNRGLFLGL EDYESHFALY PPGARYLRHV DRFRDDDRRM VSAVLYLNSA WLPEHGGQLR
MYLKDEVAYD VQPAGGCLVV FLSGEIPHEV MPASRDRLSL TGWFRRRGNE LFQ
|
|---|
| |