| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4711 |
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| Symbol | |
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| ID | 3370261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5581994 |
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| End bp | 5583172 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637655078 |
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| Product | glycine betaine/L-proline transport ATP-binding subunit |
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| Protein accession | YP_237776 |
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| Protein GI | 66047935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit
[TIGR03415] choline ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCA TCAAATTCGA CAAGGTAGAC GTCATCTTCT CCAAGGACCC GCGTGAAGCC
CTCAAGCTGC TCGATGAAGG CCTCACGCGT GACCAGATCC TCAAGAAAAC CGGACAGATC
GTCGGCGTCG AGAACGCCAG TCTGGACATC GAGAAGGGCG AAATCTGCGT CCTGATGGGC
CTGTCGGGCT CCGGCAAATC CAGCCTGTTG CGCTGTATCA ACGGCCTCAA CACCGTCAGC
CGTGGCTCCC TGTTCGTCGA GCATGAAGGC TCGCAGATCA ACATCGCCAA CTGCAGCGCA
GCCGAACTGA AAATGATGCG CACCAAGCGC ATTGCCATGG TCTTTCAGAA GTTCGCCCTG
ATGCCCTGGC TGACGGTGCG CGAAAACATC AGCTTCGGCC TGGAAATGCA GGGTCGCCCC
GAAAAGGAAC GGCGCAAGCT GGTGGATGAA AAGCTCGAGC TGGTGGGCCT GACCCAGTGG
CGCAACAAGA AGCCCGACGA ACTGTCTGGC GGCATGCAGC AGCGAGTGGG CCTGGCGCGA
GCATTGGCGA TGGACGCCGA CATCCTGCTC ATGGACGAAC CCTTCTCGGC GCTCGACCCG
CTGATCCGCC AGGGTCTGCA GGACGAACTG CTTGCCCTGC AAACCAAGCT GAGCAAGACC
ATTGTGTTCG TCAGCCACGA TCTGGACGAA GCACTGAAGC TCGGTAGCCG GATCGCCATC
ATGAAGGATG GCCGCATCGT GCAATACAGC GTGCCTGAAC AGATCGTTCT CAATCCGGCC
GATGAATACG TGCGCACCTT CGTTGCACAT ACCAACCCAC TGAACGTGCT GTGCGGTCGC
AGCCTGATGC GTACCGTCGA GGAGTGCACC CACGTCAACG GTTCGGTGTG CCTGGACCCG
AGTGGCGACT CATGGCTCGA TCTGGCCGAA GGCAACGTGA TCAAAGGTGC ACGGCAAGGT
GCCTCGGCCC TCGATCTGCA GAACTGGACC CCCGGCCAGG ACGTCGCCTC CCTGGATCGA
CGCCCCACGC TTGTGCATTC CAACATCGGC ATGCGCGACG CGCTGCAGAT CCGCTACCAG
ACCGGCAACA AACTGGTCCT GCAGGACGGC AATAAAGTGG TCGGCATTCT GGGTGATACC
GAGCTGTATC ACGCGTTGCT GGGCAAAAAC CACGGCTGA
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| Protein sequence | MSIIKFDKVD VIFSKDPREA LKLLDEGLTR DQILKKTGQI VGVENASLDI EKGEICVLMG
LSGSGKSSLL RCINGLNTVS RGSLFVEHEG SQINIANCSA AELKMMRTKR IAMVFQKFAL
MPWLTVRENI SFGLEMQGRP EKERRKLVDE KLELVGLTQW RNKKPDELSG GMQQRVGLAR
ALAMDADILL MDEPFSALDP LIRQGLQDEL LALQTKLSKT IVFVSHDLDE ALKLGSRIAI
MKDGRIVQYS VPEQIVLNPA DEYVRTFVAH TNPLNVLCGR SLMRTVEECT HVNGSVCLDP
SGDSWLDLAE GNVIKGARQG ASALDLQNWT PGQDVASLDR RPTLVHSNIG MRDALQIRYQ
TGNKLVLQDG NKVVGILGDT ELYHALLGKN HG
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