Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4699 |
Symbol | |
ID | 3370249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5568229 |
End bp | 5568771 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655066 |
Product | amino acid-binding ACT |
Protein accession | YP_237764 |
Protein GI | 66047923 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2716] Glycine cleavage system regulatory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000305264 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.738616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCATC TCGTCGTAAC GCTGGTTGCT CCCGACAAAC CGGGTCAGGT CGAACGCATC TCGAAGTGCA TTGCCGAGCA CGGCGGCAAC TGGCTGGAAA GCCGCATGTC GCGGATGGCC GGACAATTTG CCGGGATCCT CAAGGTCGGC GTCGAGGCCG AAAAGTACGA CGACCTGATC AAGGCGCTGA ACGGCCTGTC AGCCCATGGC ATCCGCATGC TGCTGGCCGA GAGCGTGGTC GAGACGTCCG ATACCACCCG GCTGATCAGC ATGGAACTGG TCGGCAACGA CCGCCCCGGC ATCGTGCGCG ACATCACCCG TTTGCTGGCC GGGCAGGGCG TCAACGTCGA ACACCTGATC ACCGACGTGT CCCCTGCGCC CATGAGCAGC GAACTACTGT TCCAGGCCAA AGCAGTGCTG GGCGTCCCGC AGGACTTGTC CCTGGATGAC CTGCAGATGG CGCTCGAGAC CCTGGCGGAT GATTTGATGG TGGAGTTGGT GCTGGGGGCC AAGGAGTCAT CCGTTTCGGG TTATCCAAGT TAA
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Protein sequence | MDHLVVTLVA PDKPGQVERI SKCIAEHGGN WLESRMSRMA GQFAGILKVG VEAEKYDDLI KALNGLSAHG IRMLLAESVV ETSDTTRLIS MELVGNDRPG IVRDITRLLA GQGVNVEHLI TDVSPAPMSS ELLFQAKAVL GVPQDLSLDD LQMALETLAD DLMVELVLGA KESSVSGYPS
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