Gene Psyr_4699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4699 
Symbol 
ID3370249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5568229 
End bp5568771 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID637655066 
Productamino acid-binding ACT 
Protein accessionYP_237764 
Protein GI66047923 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000305264 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.738616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCATC TCGTCGTAAC GCTGGTTGCT CCCGACAAAC CGGGTCAGGT CGAACGCATC 
TCGAAGTGCA TTGCCGAGCA CGGCGGCAAC TGGCTGGAAA GCCGCATGTC GCGGATGGCC
GGACAATTTG CCGGGATCCT CAAGGTCGGC GTCGAGGCCG AAAAGTACGA CGACCTGATC
AAGGCGCTGA ACGGCCTGTC AGCCCATGGC ATCCGCATGC TGCTGGCCGA GAGCGTGGTC
GAGACGTCCG ATACCACCCG GCTGATCAGC ATGGAACTGG TCGGCAACGA CCGCCCCGGC
ATCGTGCGCG ACATCACCCG TTTGCTGGCC GGGCAGGGCG TCAACGTCGA ACACCTGATC
ACCGACGTGT CCCCTGCGCC CATGAGCAGC GAACTACTGT TCCAGGCCAA AGCAGTGCTG
GGCGTCCCGC AGGACTTGTC CCTGGATGAC CTGCAGATGG CGCTCGAGAC CCTGGCGGAT
GATTTGATGG TGGAGTTGGT GCTGGGGGCC AAGGAGTCAT CCGTTTCGGG TTATCCAAGT
TAA
 
Protein sequence
MDHLVVTLVA PDKPGQVERI SKCIAEHGGN WLESRMSRMA GQFAGILKVG VEAEKYDDLI 
KALNGLSAHG IRMLLAESVV ETSDTTRLIS MELVGNDRPG IVRDITRLLA GQGVNVEHLI
TDVSPAPMSS ELLFQAKAVL GVPQDLSLDD LQMALETLAD DLMVELVLGA KESSVSGYPS