| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4698 |
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| Symbol | |
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| ID | 3370248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5567144 |
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| End bp | 5568031 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637655065 |
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| Product | RarD protein |
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| Protein accession | YP_237763 |
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| Protein GI | 66047922 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000777154 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTG CCAATCCACG CCGTGGGTAC ATTCTGGGCC TGAGTGCTTA CATCATCTGG
GGACTGTTCC CCATCTACTT CAAAGCCATT GCCGCCGTTC CGGCCATCGA GATCATCATC
CATCGCGCGC TCTGGTCAGC GCTGTTCGGC TCGATCGTGC TGATGTTCTG GAAGCATCCC
GGCTGGTGGC GCGACCTGCG CAACAACCCG CAACGGCTGG CCGTACTGGC GCTGAGCGGC
ACCCTGATCG CCAGCAACTG GATCATCTAC GTCTGGGCGG TGAATAACGG ACGCATGCTT
GAAGCCAGCC TCGGGTATTA CATCAACCCG CTGGTCAACG TGCTGCTTGG CATGTTGCTA
CTGGGCGAGC GCCTCAGACG CCTGCAGATG CTGGCGGTCG CCTTCGCCGC CATTGGCGTC
GCCCATCAGG TCTGGCACGT CGGCAGCCTG CCGTGGGTGT CGCTGGCGCT GCCATTGACC
TTCGCGTTCT ACGGGCTGAT CCGCAAACAA GCCCCGGTCG CCGCCCTGCC CGGCCTGGTC
GTCGAAACCT GGATGCTGGT GCCGCTGGCG CTGATCTGGC TGGCGATCAA CCCGACGGCC
GTGAGCGTCC AGCCAGAATT CTGGACCACG ACTCAAGCCA TCTGGCTCGC CGCAGCCGGC
CCGGTCACGC TGGTACCGCT GGTGTGCTTC AACGCCGCCG CCCGTCATTT GCCTTTCACC
ACCCTGGGCT TTCTGCAGTA CGTCGCGCCC ACACTGGTCC TGCTGCTGGC CGTGCTGCTG
TATGGCGAAC ACCTGACCAC CAGCACCCTC ATCACCTTCG CCTTCATCTG GGCCGGGCTG
GCGATCTACA GTGTGGATAT CTGGCTGAAA TCCCGCGGCC GTCACTGA
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| Protein sequence | MQAANPRRGY ILGLSAYIIW GLFPIYFKAI AAVPAIEIII HRALWSALFG SIVLMFWKHP
GWWRDLRNNP QRLAVLALSG TLIASNWIIY VWAVNNGRML EASLGYYINP LVNVLLGMLL
LGERLRRLQM LAVAFAAIGV AHQVWHVGSL PWVSLALPLT FAFYGLIRKQ APVAALPGLV
VETWMLVPLA LIWLAINPTA VSVQPEFWTT TQAIWLAAAG PVTLVPLVCF NAAARHLPFT
TLGFLQYVAP TLVLLLAVLL YGEHLTTSTL ITFAFIWAGL AIYSVDIWLK SRGRH
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