Gene Psyr_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4646 
Symbol 
ID3370196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5509622 
End bp5510575 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content60% 
IMG OID637655016 
ProductPhage integrase:Phage integrase, N-terminal SAM-like 
Protein accessionYP_237714 
Protein GI66047873 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAAAG TAGTCTCCGA CGACCACCGC AGGCTAACGG CGGTCGAATT TCAGCAGCTG 
GCCAGAGTCC CGTCAGCGGT CGAGTGGTTT GCCAACTTGG ACAACCCGCG CACACGCCGT
GCTTATCAAA ATGATCTGAC GGATTTCTCT TCCTTTATAG TGCTCGCCAG CGCCGATGAT
TTTCGCCAGG TCACCCGGTC GCACGTATTG GCCTGGCGCG CCGATCTGGA ACAACGCGGC
CTAGCCGGGG CCACCATCCG GCGCAAACTG GCCGCGCTGG CCAGCCTCTT CGATCACCTT
CTGGAAAACA ATGCCGTCGT CGGGGGCAAC CCGGTGCACG GGGTCAAAAG ACCCAGGATA
GAAAGCAACG AAGGCAAGAC CCCCGCGCTG GGCGATCACC AGGCCAAGGC CCTGCTCGAT
GCACCGGATG AAAGCACGCT GAAGGGACTG CGTGATCGGG CCATGCTGGC CGTGCTGCTC
TACCATGGCC TGCGCCGCGA AGAAGCCGCG CAGTTGCAGG TCAGCGACAT CCAGGAAAGG
CGGGGTATCC AGCACTTGAA AATCCACGGT AAAGGCGGGA AGGTGCGGTA TTTGCCACTG
CACCCCGTCG CGGCCGGGCG CATCCATATG TATCTGGAAC GTTCGGGGCA TCATCTGGTA
GACAAGAAGG TCCCGCTATT TATATCGCTA CGAGGCAAAT CGACCGGTGC CGGCGTTTCG
GCCAACGGGA TCTATACCGT GGTCGGTGCC TACGCGAAGA AGGCAGGGAT TAAGGTTGAC
GGCTTGGGCG TTCATGGCCT CAGAGCAACC GCAGCCACCA ACGCCCTGGA GCACGAAGCA
GACATCGCAA AGGTCCAGGC ATGGCTGGGT CATGCCAACA TCAGCACGAC CAAGATCTAT
GATCGGCGCG AGAACCGGCC GGAGGATTCA CCAACCTTCA AAGTGAAATA CTGA
 
Protein sequence
MTKVVSDDHR RLTAVEFQQL ARVPSAVEWF ANLDNPRTRR AYQNDLTDFS SFIVLASADD 
FRQVTRSHVL AWRADLEQRG LAGATIRRKL AALASLFDHL LENNAVVGGN PVHGVKRPRI
ESNEGKTPAL GDHQAKALLD APDESTLKGL RDRAMLAVLL YHGLRREEAA QLQVSDIQER
RGIQHLKIHG KGGKVRYLPL HPVAAGRIHM YLERSGHHLV DKKVPLFISL RGKSTGAGVS
ANGIYTVVGA YAKKAGIKVD GLGVHGLRAT AATNALEHEA DIAKVQAWLG HANISTTKIY
DRRENRPEDS PTFKVKY