| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4591 |
|---|
| Symbol | |
|---|
| ID | 3370140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5450927 |
|---|
| End bp | 5452339 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637654960 |
|---|
| Product | DNA circulation, N-terminal |
|---|
| Protein accession | YP_237659 |
|---|
| Protein GI | 66047818 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4228] Mu-like prophage DNA circulation protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.422243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAT GGCGTGACAG CCTGCTGCCA GCGTCTTTCC GGGGCGTCGG TTTTTTCATT
GAAAAAGCCG TCGTCCCGGC AGGCCGCAAG GGGCAGTTGC ATGAGTTTCC ACAACGCGAC
GAGCCTTATT TCGAGTCGCT GGGCAAACAG TCGAAAGTGC ATACGCTGAC GGGGTTCATT
GTCGGTCCCG ACTGTTTCGA ACAGCGAGAC AAATTGCTGC AGGCACTGGA GCAGGAAGGT
GCCGGCGAGC TGGTGCATCC CTGGCTGGGT CGCGTGCAGG TCCAGGTTGG CGAATGTGGT
GTTACACACA ACCTGAGCGA AGGCGGACTC GTCCGGCTGG ACCTGAAATT CTATCCGGCC
AACCCGCTCA AGTTTCCCGT GTCGACGCTC AATACGCGAC GGCAGTTGCT GGGCGCATCC
GAGAGCCTGC TGGACTCGGC GCTCAGGCGC TACCGCTCGG TGATGGCCAC AGTGGACGCG
GTGCGTATCA ATATTCAGGC GCTGCGCAGC GCCCTGTCGG GTGTATTCGC GACCATTCAG
CGGCAGTTCA CACCGTTCAT GACGATTTAT TCGGATGTCA CCGCGCTGGT GCATTCGCTG
GTCAATGCGC CGTTGACGGT CAGCACGCTG TTTAGCACGT TCTTCGCCAG TTTCGACGGT
GACAGCCGTC GAGCCAGAAG AGCGAATGGC ACCAGCAGTA TTGGCGGGGC GAGTACGGGA
GCAGGTTCCG GCAGCTCGAC AGGGGGCGGT TCAGGCAATG GTTCCGCGAG TGGCAGTAAC
GGCACCGCTG CGAGCAGCGC GGCAGCTAGG TCCGGCAGCA ATGGCGGGGT GTCCTCTGTT
GAAACGGTCG ATTACCGGTC GGTGATTTCC GAGGCCACGC AACAGGCGGA GGCAGTGTCC
GGCATCAATC TGGTCAGCCA GAGCAGCGGG CTGGATACCG GCGTGACGGC GCAGGCCGCG
GCCAATCTGG TCCAGGATGC CTTGTTGGTC AAGGTGGCGA AAATCGTCGC GAGCATGCCG
GTTGCGACGA CCGTCACGCC GCTCACGGTG GTGCCGTCGC TGGATCAGCA AGTGACGCAA
GCGCTGCAAC GCGTGGATGT GCCGGTTGCC GATGACGTCA TCGAACTGCG CGACACGCTG
AGTTCAGCCA TCTGGGAAGC GTCGTTGAAA GCCGACCCTG AACATTACCT GGTGCTCAAC
ACGTTGCGTC AGGCGTTGAT CCGGCACCTC AACGCGGTGG CGGCCTCTGG CGTGCGTCTG
GTGGACCTGA AGGTGTCCGA GCCGTTGCCC GCGCTGGTGC TGGCCTATCG CCGATTCGGT
GACGCCAGCC GGGCGCAGGA AATGGTGCAG CGCAATCGGC TGGCCCATCC GGGTTTCGTG
CCGCCCGGCA CGCTGAAGAT CGCTCAGGAG TGA
|
|---|
| Protein sequence | MSTWRDSLLP ASFRGVGFFI EKAVVPAGRK GQLHEFPQRD EPYFESLGKQ SKVHTLTGFI
VGPDCFEQRD KLLQALEQEG AGELVHPWLG RVQVQVGECG VTHNLSEGGL VRLDLKFYPA
NPLKFPVSTL NTRRQLLGAS ESLLDSALRR YRSVMATVDA VRINIQALRS ALSGVFATIQ
RQFTPFMTIY SDVTALVHSL VNAPLTVSTL FSTFFASFDG DSRRARRANG TSSIGGASTG
AGSGSSTGGG SGNGSASGSN GTAASSAAAR SGSNGGVSSV ETVDYRSVIS EATQQAEAVS
GINLVSQSSG LDTGVTAQAA ANLVQDALLV KVAKIVASMP VATTVTPLTV VPSLDQQVTQ
ALQRVDVPVA DDVIELRDTL SSAIWEASLK ADPEHYLVLN TLRQALIRHL NAVAASGVRL
VDLKVSEPLP ALVLAYRRFG DASRAQEMVQ RNRLAHPGFV PPGTLKIAQE
|
|---|
| |