| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4580 |
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| Symbol | trpD |
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| ID | 3370129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5441978 |
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| End bp | 5443039 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654949 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_237648 |
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| Protein GI | 66047807 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00120881 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCC CCATGGATAT CAAAAACGCG CTCAATCGCG TGGTCAACCA GCTGGACCTG
ACCACTGAAG AGATGAGCGA TGTGATGCGC GAAATCATGA CTGGCCAATG CACTGAAGCG
CAGATCGGTG CGTTTCTGAT GGGCATGCGC ATGAAGAGCG AAACCATCGA TGAAATCGTC
GGTGCGGTGT CGGTCATGCG CGAGCTGGCT GGCAAGGTCG AACTGAAAAC CCTGGACGGC
GTGGTCGACA TCGTTGGCAC GGGCGGCGAT GGCGCGAATA TTTTCAACGT GTCGACAGCT
TCCGCTTTCG TCATCGCCGC CGCGGGCTGC ACCGTGGCCA AGCATGGTAA TCGTGCCGTC
TCGGGCAAAA GCGGCAGTGC CGATCTGCTC GAGGCTGCCG GGGTTTATCT GAACCTCACG
CCTGTTCAGG TGGCGCGTTG CATCGACAGC GTGGGTATCG GCTTCATGTT CGCCCAGTCT
CATCACACCG CCATGAAGCA CACGGCCGGG CCGCGCCGCG AGCTGGGTCT GCGCACACTG
TTCAATATGC TCGGCCCGCT GACCAATCCG GCCGGCGTTC GTCATCAGAT CGTCGGCGTG
TTCAACCAGG CGCTGTGCCG CCCGCTGGCC GAGGTGCTGC TGCGTCTGGG CAGCAAGCAT
GTGCTGGTGG TCCACTCGCA GGACGGCCTG GACGAATTCA GTCTGGCCGC ACCGACCTTC
GTCGCCGAGC TGAAAAACGG CGAAGTCACA GAATACTGGG TACAGCCCGA AGACCTGGGC
ATCAAAAGCC AGAGCCTGTA CGGCCTCGCC GTGGAAAGCC CGGCCGCTTC GCTGGAGCTG
ATCCGCGATG CGCTGGGACG CCGCAAAACC GAGAACGGGC AGAAAGCTGC GGAGATGATC
GTGCTCAATG CCGGCGCCGC GCTTTATGCT GCTGATCACG CCACAAGCCT GAAAGAGGGC
GTGGCTCTGG CGCACGATGC GCTGCACACT GGCCTGGCGC GGGAAAAACT GGAAGAACTG
GGTGCCTTCA CGGCGGTATT CAAGCAGGAG AACGAAGCAT GA
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| Protein sequence | MSTPMDIKNA LNRVVNQLDL TTEEMSDVMR EIMTGQCTEA QIGAFLMGMR MKSETIDEIV
GAVSVMRELA GKVELKTLDG VVDIVGTGGD GANIFNVSTA SAFVIAAAGC TVAKHGNRAV
SGKSGSADLL EAAGVYLNLT PVQVARCIDS VGIGFMFAQS HHTAMKHTAG PRRELGLRTL
FNMLGPLTNP AGVRHQIVGV FNQALCRPLA EVLLRLGSKH VLVVHSQDGL DEFSLAAPTF
VAELKNGEVT EYWVQPEDLG IKSQSLYGLA VESPAASLEL IRDALGRRKT ENGQKAAEMI
VLNAGAALYA ADHATSLKEG VALAHDALHT GLAREKLEEL GAFTAVFKQE NEA
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