Gene Psyr_4578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4578 
Symbol 
ID3370127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5440415 
End bp5441110 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID637654947 
Producthypothetical protein 
Protein accessionYP_237646 
Protein GI66047805 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0095] Lipoate-protein ligase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACT CGATCATCGA CATATGTGTC GAACAAGGCC TGCAGGCCGA GCAGGATCTT 
CTGGCGTCGG TATGCTCCGG GGCGGCAGAC CACGGGCTGC TGTTCTGGCG GCCCAATGAT
CGCGCGCTGG TCATGCCACG GCGGATGAGC CGGTTAGCGG GTTTTGCCGA GGCCAGCGAG
ACCCTGTCGG ACAACGCATG GCCCGTCCTC TTGCGTGAAA CCGGCGGCGA GCCAGTGCCG
CAGTCCTCTG CCACGCTGAA CATCGCACTG ATCTACGCGC AACCGCCCAC TGACGTGGAT
CGTGACCGTA TAGAAACCGC CTACCTGCGA TTATGTCAGC CGATTCTCGA TCTGATGACC
GACCTGGGTG GCCAAGCCTC ACTGGGTGAG GTGGCAGGCG CATTCTGCGA CGGTCGCTTC
AACGTCAACC TCAATGGTCG CAAAATGGTT GGAACGGCTC AGCGCTGGCG TCAGAGCCAG
GGCGGAAGGC GTCCCGTAGT GCTGGCGCAT GGTGCCTTGC TGCTGGATAA CGAGCGCGTT
CAGATGGCGG CCGCGGTAAA CCGTTTCAAT GAGCTGTGCG AGCTTGAGCC GCGTGTCCAG
GCAGGCAGCC ACATTGCCTT GTACGAAGCG TTTCCGGGTG CTGACGTCCT GGAGCGTCTG
GCGCAGGCTT ACCGCAAGCT GCTCGCCGGG CTCTGA
 
Protein sequence
MQDSIIDICV EQGLQAEQDL LASVCSGAAD HGLLFWRPND RALVMPRRMS RLAGFAEASE 
TLSDNAWPVL LRETGGEPVP QSSATLNIAL IYAQPPTDVD RDRIETAYLR LCQPILDLMT
DLGGQASLGE VAGAFCDGRF NVNLNGRKMV GTAQRWRQSQ GGRRPVVLAH GALLLDNERV
QMAAAVNRFN ELCELEPRVQ AGSHIALYEA FPGADVLERL AQAYRKLLAG L