| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4533 |
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| Symbol | rplF |
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| ID | 3370073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5395746 |
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| End bp | 5396279 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637654893 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_237601 |
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| Protein GI | 66047760 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000653047 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0640617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACGCG TCGCTAAGAA CCCCGTTAAG CTGCCATCCG GCGTCGAAGT CAAACTCGTC
GGCCAGCTGC TTTCGGTGAA GGGTGCCAAG GGCACTCTAG AACTGAACAT CCATTCGTCC
GTTGAGGTTG TTGTAGAAGC TGGTGAGCTG CGTTTCGTTG CTCGCAATGG CGATCAACAA
ACCCGCGCAA TGGCAGGCAC CACTCGTGCA CTGGTAAACA ACATGGTCCA AGGCGTAAGC
CAAGGCTTCG AGCGCAAGCT CCAGCTGGTC GGTGTTGGTT ACAAGGCGCA AGCAAAAGGC
ACGGTACTGA ACCTTGCACT TGGCTTCTCG CACCCAGTGG ACTACGAATT GCCGAATGGC
ATCACCGCTG AGACCCCCAG CCAGACCGAT ATCCTGATTC GCGGTATCGA TAAGCAGTTG
GTTGGTCAAG TGGCCGCTGA GATCCGCGAC TTCCGCCGTC CTGAGCCTTA CAAAGGCAAA
GGTGTGCGTT ACGCAGACGA AGTCGTCCGC CGTAAAGAAG CCAAGAAGAA GTAG
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| Protein sequence | MSRVAKNPVK LPSGVEVKLV GQLLSVKGAK GTLELNIHSS VEVVVEAGEL RFVARNGDQQ
TRAMAGTTRA LVNNMVQGVS QGFERKLQLV GVGYKAQAKG TVLNLALGFS HPVDYELPNG
ITAETPSQTD ILIRGIDKQL VGQVAAEIRD FRRPEPYKGK GVRYADEVVR RKEAKKK
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