Gene Psyr_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4472 
Symbol 
ID3370012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5332630 
End bp5333154 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID637654832 
Productputative lipoprotein 
Protein accessionYP_237540 
Protein GI66047699 
COG category[S] Function unknown 
COG ID[COG3495] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGC GCATGCTACT CACTCTGCTG TTCTCGGTTA CCACTCAAGT GTGGGCCGCC 
GAGCCGCGTG AGCTGACCTG GAATGACATG ATTCCACCCG ATGCACCTGT GGTGAAGCCG
GTAACGGCTC CGCTCCACGA TATGTCCAAG CTGTCCGATG CACTGGCCAT GGAGGCAGCG
CCTGCGGCCC ACCAACTGGC GCCGCATGCG CCGGTGGTCA AGGCACTGGA TGGCAAACTG
GTGCGTTTAC CGGGCTACAT CGTGCCGCTC GAGGTCAGTG AGGAAGGCCG GGTGACGGAG
TTTTTGCTGG TGCCGTATTT CGGCGCCTGC ATCCATGTGC CGCCGCCACC GGCGAACCAG
ATCGTGCATG TCACGAGCGA GCTGGGTGTG AAGGTCGATG AGCTGTATCA GCCGTACTGG
ATCGAAGGAC CGATGCAGGC CAAGTCGTCT TCCAGCGAAC TGGCAGAAGC GGGCTATCAG
ATGCAGGCAG ACAAGATTCT TGTCTACGAG TTGCCGGATT CATAA
 
Protein sequence
MMRRMLLTLL FSVTTQVWAA EPRELTWNDM IPPDAPVVKP VTAPLHDMSK LSDALAMEAA 
PAAHQLAPHA PVVKALDGKL VRLPGYIVPL EVSEEGRVTE FLLVPYFGAC IHVPPPPANQ
IVHVTSELGV KVDELYQPYW IEGPMQAKSS SSELAEAGYQ MQADKILVYE LPDS