Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4428 |
Symbol | |
ID | 3369968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5296726 |
End bp | 5297805 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654788 |
Product | inner-membrane translocator |
Protein accession | YP_237496 |
Protein GI | 66047655 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGC CATTGATAGT AACTGCCGCG CAAAAAGTCG GGCCCAGAGG CACGCTGACC GCAGGCTGCG TAATCCTTGC AGTGCTGCTG GCACTGCCGC TGCTGTCGCT GCTGCCTGCC GATAACAGCT TTCAGGTCTC GGCCTACACC CTGACCCTGG TGGGCAAGAT CCTCTGCTAC GCCATTGTCG CGCTGGCGCT GGACCTGGTC TGGGGCTACG CCGGGCTGCT GTCGCTGGGC CACGGCCTGT TCTTCGCCCT GGGCGGTTAT GCCATGGGCA TGTACCTGAT GCGCCAGGCC GCTGGGGATG GGTTGCCGGC CTTCATGACC TTCCTGTCGT GGACCGAGCT GCCATGGTAC TGGGCGGGCA CCGACCATTT CCTCTGGGCG ATGTGCCTGG TGGTATTGGC ACCGGGACTG CTGGCGCTGA TCTTCGGCTT CTTCGCCTTC CGCTCGCGGA TCAAGGGCGT GTACTTCTCG ATCATGACCC AGGCGCTGAC CTTCGCCGGC ATGCTGCTGT TCTTTCGCAA CGAGACCGGC TTTGGCGGCA ACAACGGCTT CACCAACTTC CGCAGCATTC TGGGCTTCAG CATCAGTGCA CAAGGGACCA GAGCCGCGCT GTTTCTGGCC ACGGTCGCAC TGCTGGTGGC CAGTCTGTAC ATCGGCTGGC GCCTGGCGCA GAGCAAGTTC GGCCGCGTGC TGACCGCGCT GCGCGATGCG GAAAACCGCC TGATGTTCTG CGGTTACGAT CCGCGCGGCT TCAAACTGTT CGTCTGGGTG CTGAGCGCCG TGCTGTGCGG TCTGGCTGGC GCCTTGTATG TGCCGCAGGT CGGCATTATC AACCCCAGCG AAATGTCACC GACCAACTCC ATTGAAGCCG CTGTGTGGGT AGCCCTGGGT GGCCGTGGCA CGCTGATCGG CCCGCTGCTG GGCGCAGGTC TGGTGAACGG CATGAAAAGC TGGTTCACCA TGGCCTTCCC GGAATACTGG CTGTTCTTTC TCGGCGCGCT GTTCATCATC GTCACGCTGT ATCTGCCCAA GGGCGTGATC GGCATGCTGA AGAAAAGGAG CGAGCAATGA
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Protein sequence | MSQPLIVTAA QKVGPRGTLT AGCVILAVLL ALPLLSLLPA DNSFQVSAYT LTLVGKILCY AIVALALDLV WGYAGLLSLG HGLFFALGGY AMGMYLMRQA AGDGLPAFMT FLSWTELPWY WAGTDHFLWA MCLVVLAPGL LALIFGFFAF RSRIKGVYFS IMTQALTFAG MLLFFRNETG FGGNNGFTNF RSILGFSISA QGTRAALFLA TVALLVASLY IGWRLAQSKF GRVLTALRDA ENRLMFCGYD PRGFKLFVWV LSAVLCGLAG ALYVPQVGII NPSEMSPTNS IEAAVWVALG GRGTLIGPLL GAGLVNGMKS WFTMAFPEYW LFFLGALFII VTLYLPKGVI GMLKKRSEQ
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