Gene Psyr_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4389 
Symbol 
ID3369929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5251210 
End bp5251416 
Gene Length207 bp 
Protein Length68 aa 
Translation table11 
GC content49% 
IMG OID637654749 
ProductFlp/Fap pilin component 
Protein accessionYP_237457 
Protein GI66047616 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.34971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTTA CCCAGTTGTA CGTCAGCATC TACACGCGTA TTCAGTCTTT TTTCAAGGAC 
AAGGAGGCGG CATCGGCGAT CGAGTACGCA GTGATTGTAG CCATGGTGGC GCTGGTACTG
TTTGCGTTCG TGACCCCCTT GGGGGACGCT ATCAAAGGAA AATTCAATGA TATTGTCACT
GGATTGGGTG GTACTACGGT AAGTTAG
 
Protein sequence
MFLTQLYVSI YTRIQSFFKD KEAASAIEYA VIVAMVALVL FAFVTPLGDA IKGKFNDIVT 
GLGGTTVS