Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4353 |
Symbol | |
ID | 3369893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5208025 |
End bp | 5208630 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654713 |
Product | rare lipoprotein B |
Protein accession | YP_237421 |
Protein GI | 66047580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAAAC GCAATTTGCT GGTGATGGGC CTGGCTGTTC TGTTGAGTGC CTGTGGCTTC CAGCTGCGTG GCACCGGTAC CACCGAGCTG GCGATCAAGG AGCTGGATGT CAGCGCCCGC AACGCCTATG GCGAAACCGT GACGCAACTC ACTCGCCTGC TGACCAGCTC TGGCGTCAAG GTCTATACCG GCGCGCCTTA CAAGCTGATG CTGACCAACG AAGCCGAGAC TCAGCGCGCC ATCAGCTACT CGGGCTCGGG TCGCTCGGCT GAATACCAGC TGACCACCAC CCTGACCTAT GAAGTGCATG GCGACAAGGA TCGCTTCCTG CTTGGCGATA AAGTCACCGC AGACCGTTCC TACGTGCACG ACGGCAACAA TCTGACCGGT TCCGACCAGG AAGCCTCCCA GGTTCGTCAG GAAATGCGCA ACGACCTGAT CCAGAAAATG ATGGCTCGCT TGCAGCAACT GACCCCTTCG CGTCTGGACG AGCTGCAGGC CAAGGCCGAT GCGGTTGCCA AGGCCGAAGC CGACGCACTG GAGGCTGCCC AGCGAATCCG CGACGAGACG CCTCAGCAGT CGCCTGTCGA AGTTCCAGCC AGATAA
|
Protein sequence | MIKRNLLVMG LAVLLSACGF QLRGTGTTEL AIKELDVSAR NAYGETVTQL TRLLTSSGVK VYTGAPYKLM LTNEAETQRA ISYSGSGRSA EYQLTTTLTY EVHGDKDRFL LGDKVTADRS YVHDGNNLTG SDQEASQVRQ EMRNDLIQKM MARLQQLTPS RLDELQAKAD AVAKAEADAL EAAQRIRDET PQQSPVEVPA R
|
| |