Gene Psyr_4353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4353 
Symbol 
ID3369893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5208025 
End bp5208630 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content60% 
IMG OID637654713 
Productrare lipoprotein B 
Protein accessionYP_237421 
Protein GI66047580 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC GCAATTTGCT GGTGATGGGC CTGGCTGTTC TGTTGAGTGC CTGTGGCTTC 
CAGCTGCGTG GCACCGGTAC CACCGAGCTG GCGATCAAGG AGCTGGATGT CAGCGCCCGC
AACGCCTATG GCGAAACCGT GACGCAACTC ACTCGCCTGC TGACCAGCTC TGGCGTCAAG
GTCTATACCG GCGCGCCTTA CAAGCTGATG CTGACCAACG AAGCCGAGAC TCAGCGCGCC
ATCAGCTACT CGGGCTCGGG TCGCTCGGCT GAATACCAGC TGACCACCAC CCTGACCTAT
GAAGTGCATG GCGACAAGGA TCGCTTCCTG CTTGGCGATA AAGTCACCGC AGACCGTTCC
TACGTGCACG ACGGCAACAA TCTGACCGGT TCCGACCAGG AAGCCTCCCA GGTTCGTCAG
GAAATGCGCA ACGACCTGAT CCAGAAAATG ATGGCTCGCT TGCAGCAACT GACCCCTTCG
CGTCTGGACG AGCTGCAGGC CAAGGCCGAT GCGGTTGCCA AGGCCGAAGC CGACGCACTG
GAGGCTGCCC AGCGAATCCG CGACGAGACG CCTCAGCAGT CGCCTGTCGA AGTTCCAGCC
AGATAA
 
Protein sequence
MIKRNLLVMG LAVLLSACGF QLRGTGTTEL AIKELDVSAR NAYGETVTQL TRLLTSSGVK 
VYTGAPYKLM LTNEAETQRA ISYSGSGRSA EYQLTTTLTY EVHGDKDRFL LGDKVTADRS
YVHDGNNLTG SDQEASQVRQ EMRNDLIQKM MARLQQLTPS RLDELQAKAD AVAKAEADAL
EAAQRIRDET PQQSPVEVPA R