Gene Psyr_4335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4335 
Symbol 
ID3369875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5187086 
End bp5187577 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content58% 
IMG OID637654695 
Productregulatory proteins, AsnC/Lrp 
Protein accessionYP_237403 
Protein GI66047562 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0627745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTGCA TCGTGAGCAA GCTCGACAGA TACGACCTGA GCATTTTGGC TGAATTGCAA 
CGGGACGCAC GCATATCCAA CCAGGAATTG GCCGAACGCA TTGGTCTGTC GCCGTCACCC
TGCTCGCGCC GGGTCAAGCA ACTGGAAGAC GACGGTTACA TCGTGCGCCA GGTTGCCCTG
CTGGATCGCA AGAAACTGGG TCTGAACCTG ACCGCCTACG TGCTGATCGG CATGGACCGG
CACACGCCCG AGCGCTTCGA GAATTTCGAG CAGCAGATCC GCAACCTGCC TCAGGTTCTG
GAATGCAGCC TGGTGACCGG CATGGACGCG GACTATCAAC TGAAAGTGGT GGTGCCGGAC
ATGGATCACT ATCAGAAACT GCTGTTGGGC CATCTGACCC GCATCGAAGG CGTGACCAGC
GTCAAATCGA GCTTTGTGCT CAATCAGGTG CTGGCCAGCA CCGAAATGCC GCTGACTCAC
CTGCGCAACT GA
 
Protein sequence
MGCIVSKLDR YDLSILAELQ RDARISNQEL AERIGLSPSP CSRRVKQLED DGYIVRQVAL 
LDRKKLGLNL TAYVLIGMDR HTPERFENFE QQIRNLPQVL ECSLVTGMDA DYQLKVVVPD
MDHYQKLLLG HLTRIEGVTS VKSSFVLNQV LASTEMPLTH LRN