Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4335 |
Symbol | |
ID | 3369875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5187086 |
End bp | 5187577 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637654695 |
Product | regulatory proteins, AsnC/Lrp |
Protein accession | YP_237403 |
Protein GI | 66047562 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0627745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGTGCA TCGTGAGCAA GCTCGACAGA TACGACCTGA GCATTTTGGC TGAATTGCAA CGGGACGCAC GCATATCCAA CCAGGAATTG GCCGAACGCA TTGGTCTGTC GCCGTCACCC TGCTCGCGCC GGGTCAAGCA ACTGGAAGAC GACGGTTACA TCGTGCGCCA GGTTGCCCTG CTGGATCGCA AGAAACTGGG TCTGAACCTG ACCGCCTACG TGCTGATCGG CATGGACCGG CACACGCCCG AGCGCTTCGA GAATTTCGAG CAGCAGATCC GCAACCTGCC TCAGGTTCTG GAATGCAGCC TGGTGACCGG CATGGACGCG GACTATCAAC TGAAAGTGGT GGTGCCGGAC ATGGATCACT ATCAGAAACT GCTGTTGGGC CATCTGACCC GCATCGAAGG CGTGACCAGC GTCAAATCGA GCTTTGTGCT CAATCAGGTG CTGGCCAGCA CCGAAATGCC GCTGACTCAC CTGCGCAACT GA
|
Protein sequence | MGCIVSKLDR YDLSILAELQ RDARISNQEL AERIGLSPSP CSRRVKQLED DGYIVRQVAL LDRKKLGLNL TAYVLIGMDR HTPERFENFE QQIRNLPQVL ECSLVTGMDA DYQLKVVVPD MDHYQKLLLG HLTRIEGVTS VKSSFVLNQV LASTEMPLTH LRN
|
| |