Gene Psyr_4199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4199 
Symbol 
ID3369738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4995788 
End bp4996309 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content58% 
IMG OID637654559 
ProductSmpA/OmlA 
Protein accessionYP_237267 
Protein GI66047426 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA CCAAGCTCTT GCTAACCAGT TTCACCTTCG TGGGACTGCT CGCACTCGCC 
GGTTGTTCAT TCCCCGGGGT TTACAAAATC GACATCCAGC AGGGTAATGT CGTCACGCAG
GACATGATAG ACCAGTTACG CCCCGGAATG ACCCGGCGGC AAGTACGGTT TATCATGGGC
AACCCCCTGC TGACCGACAC TTTCCACTCC GATCGGTGGG ATTACCTGTA CAGCCTGCAG
CCAGGTGGCG GTGAACGCCA GCAGGAGCGT GTCAGCCTCA TATTCAACGG CAATGACCAG
CTCGTGAGCC TGTCTGGCGA CTTCATGCCC GGCGTCAGCC GCGATGAAGC CATTCTCGGC
AAGGACAGCA ACACCACTGT CCCGGCAGAG AACCAGCCAG TGCAGCAGCC TGAAGAGCCG
GCCAAGCCAG GTTCGTTGCT GGATAAAATC CAGAAAGACG TGGACAGCGT CGAGACCGTA
CCGGTCCCGA CTCAGGAACC GCTGGACACC AACTCCCGGT AG
 
Protein sequence
MQNTKLLLTS FTFVGLLALA GCSFPGVYKI DIQQGNVVTQ DMIDQLRPGM TRRQVRFIMG 
NPLLTDTFHS DRWDYLYSLQ PGGGERQQER VSLIFNGNDQ LVSLSGDFMP GVSRDEAILG
KDSNTTVPAE NQPVQQPEEP AKPGSLLDKI QKDVDSVETV PVPTQEPLDT NSR