Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4199 |
Symbol | |
ID | 3369738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4995788 |
End bp | 4996309 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637654559 |
Product | SmpA/OmlA |
Protein accession | YP_237267 |
Protein GI | 66047426 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2913] Small protein A (tmRNA-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACA CCAAGCTCTT GCTAACCAGT TTCACCTTCG TGGGACTGCT CGCACTCGCC GGTTGTTCAT TCCCCGGGGT TTACAAAATC GACATCCAGC AGGGTAATGT CGTCACGCAG GACATGATAG ACCAGTTACG CCCCGGAATG ACCCGGCGGC AAGTACGGTT TATCATGGGC AACCCCCTGC TGACCGACAC TTTCCACTCC GATCGGTGGG ATTACCTGTA CAGCCTGCAG CCAGGTGGCG GTGAACGCCA GCAGGAGCGT GTCAGCCTCA TATTCAACGG CAATGACCAG CTCGTGAGCC TGTCTGGCGA CTTCATGCCC GGCGTCAGCC GCGATGAAGC CATTCTCGGC AAGGACAGCA ACACCACTGT CCCGGCAGAG AACCAGCCAG TGCAGCAGCC TGAAGAGCCG GCCAAGCCAG GTTCGTTGCT GGATAAAATC CAGAAAGACG TGGACAGCGT CGAGACCGTA CCGGTCCCGA CTCAGGAACC GCTGGACACC AACTCCCGGT AG
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Protein sequence | MQNTKLLLTS FTFVGLLALA GCSFPGVYKI DIQQGNVVTQ DMIDQLRPGM TRRQVRFIMG NPLLTDTFHS DRWDYLYSLQ PGGGERQQER VSLIFNGNDQ LVSLSGDFMP GVSRDEAILG KDSNTTVPAE NQPVQQPEEP AKPGSLLDKI QKDVDSVETV PVPTQEPLDT NSR
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