| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4178 |
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| Symbol | truB |
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| ID | 3369715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4970069 |
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| End bp | 4970986 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637654536 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_237246 |
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| Protein GI | 66047405 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.224491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTCAGG TCAAGCGTAT ACGCCGCAAT GTCAGCGGGA TCATCCTGCT CGACAAGCCA
CTGGGTTTCA CCTCCAACGC CGCTCTGCAA AAGGTTCGCT GGCTGCTCAA CGCCGAGAAA
GCCGGTCACA CCGGCAGCCT CGATCCTCTG GCAACGGGCG TTCTGCCGTT GTGCTTTGGT
GAGGCGACCA AGTTCTCTCA GTACCTGCTC GATTCGGACA AGTCCTACGA GACCCTGGCG
CAACTGGGCA AGACCACTAC CACTGCCGAC TCTGAAGGCG AGGTTTTGCT CACGCGTCCG
GTGACCGTTG GTCGCGACGA TATCGAAGCG GCTCTGCCGC ATTTTCGCGG ACAAATCAGC
CAGATACCTC CCATGTACTC GGCCCTCAAG CGTGATGGCC AGCCACTTTA CAAGCTGGCA
CGTGCAGGGG AAGTAGTGGA GCGCGAGCCC CGTTCTGTTA CTATTGCGCG CCTGGAATTA
CTTGCTTGTG AAGGTGACAC AGCACGTCTG TCCGTCGATT GCAGCAAAGG CACCTATATC
CGCACGCTGG TCGAGGATAT CGGTGAGAAG CTTGGTTGTG GTGCTTACGT CGCAGAGCTG
CGTCGTACCC AGGCCGGGCC TTTCACGCTG GCTCAGACAG TGACGCTGGA AGAGCTCGAG
CAGGTGCATG CCGACGGCGG CAATGAAGCG GTTGACCGTT TCCTGATGCC ATCGGACAGC
GGTCTGCTGG ACTGGCCGCT GTTGAAGTTT TCGGAACACA GTTCGTTTTA CTGGTTGCAT
GGTCAGCCAG TACGCGCGCC GGACGCACCG AAATTCGGTA TGGTTCGCGT GCAGGATCAC
GAAGGTCGCT TCATCGGTAT CGGTGAAGTC GCCGAAGACG GGCGCATTGC GCCGCGTCGC
TTGATTCGGT CAGAGTGA
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| Protein sequence | MAQVKRIRRN VSGIILLDKP LGFTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG
EATKFSQYLL DSDKSYETLA QLGKTTTTAD SEGEVLLTRP VTVGRDDIEA ALPHFRGQIS
QIPPMYSALK RDGQPLYKLA RAGEVVEREP RSVTIARLEL LACEGDTARL SVDCSKGTYI
RTLVEDIGEK LGCGAYVAEL RRTQAGPFTL AQTVTLEELE QVHADGGNEA VDRFLMPSDS
GLLDWPLLKF SEHSSFYWLH GQPVRAPDAP KFGMVRVQDH EGRFIGIGEV AEDGRIAPRR
LIRSE
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