Gene Psyr_4022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4022 
Symbol 
ID3369558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4789480 
End bp4790460 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content62% 
IMG OID637654380 
Productintegral membrane protein 
Protein accessionYP_237090 
Protein GI66047249 
COG category[S] Function unknown 
COG ID[COG1300] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.96338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0627299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA GCCTGTTTGA AACCCGCCAT CAGCAGGAGT GGCAACGCTT CGAGCAGCGC 
CTGACGGCCC TTGAACAAGG CAAGGGCGAT GTCAGCGGCG GCGCGACCTT TCCCGGCGAT
TATCGACGCC TCTGCCACCA TCTGGCGCTG GCACAGGAAC GCGGCTACAG CAGCCATCTG
GTCGACCCCC TGCATCAGTT GGCCATGCGC GGTCATCAGC AACTTTACCG CCATCGCAGC
ACTGCCGGAG TGCGACTGCT GAGCTTCGTT CTGGCAGACT TTCCGCGACG CGTGCGGGCC
GAGTGGCGCT TTGTGCTGGT TGCCAGCCTG CTGCTGTTCG GTAGCCTGAT CGGCATGGCG
TTGCTGGTCT ATGGTTTTCC ACAACTGATC TACAGCGTCG TCAGCCCCGA ACAACTGGCA
GACATGCAGA GTATGTATGA CCCGTCGGCC AGTCGTGTCG GACAGCCCGT CGAACGGGGT
TCCGATACGG ACTGGATGAT GTTCGGCTAC TACATCATGA ACAACATCGG CATCGCCTTC
CAGACCTATG CCAGCGGCTT GCTGTTCGGG CTGGGCAGTC TGTTTTTCCT GCTCTTCAAC
GGCTTGATGA CCGGCGCAAT CGCCGGGCAC CTGACAGACA TCGGTTACGG ACAGACCTTC
TGGCCCTTCG TCATCGGTCA CGGCGCCTTC GAGCTGACGG CCATCGCTCT TGCCGGGGCT
GCGGGCCTCA AGCTGGGCTG GGCCTTGCTG GCCCCCGGAC GGCTGACGCG CAGCGCCGCC
CTGCGCATCG CCGCGCGGGC CAGCATGCAA CTGGTCGGCG GGGTGATCCT GTTTCTGCTG
ATCGCAGCCT TCATCGAGGC GTACTGGTCA TCGATGACCT GGCCCGGGCC GCTTCTCAAG
TACCTGACAG GTGCCGTCCT GTGGTTGCTG GTGGCCGCGT ATCTGACTCT GGCAGGACGT
ACACCTCATG CGCCTGACTG A
 
Protein sequence
MKQSLFETRH QQEWQRFEQR LTALEQGKGD VSGGATFPGD YRRLCHHLAL AQERGYSSHL 
VDPLHQLAMR GHQQLYRHRS TAGVRLLSFV LADFPRRVRA EWRFVLVASL LLFGSLIGMA
LLVYGFPQLI YSVVSPEQLA DMQSMYDPSA SRVGQPVERG SDTDWMMFGY YIMNNIGIAF
QTYASGLLFG LGSLFFLLFN GLMTGAIAGH LTDIGYGQTF WPFVIGHGAF ELTAIALAGA
AGLKLGWALL APGRLTRSAA LRIAARASMQ LVGGVILFLL IAAFIEAYWS SMTWPGPLLK
YLTGAVLWLL VAAYLTLAGR TPHAPD