Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4022 |
Symbol | |
ID | 3369558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4789480 |
End bp | 4790460 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654380 |
Product | integral membrane protein |
Protein accession | YP_237090 |
Protein GI | 66047249 |
COG category | [S] Function unknown |
COG ID | [COG1300] Uncharacterized membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.96338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0627299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAGA GCCTGTTTGA AACCCGCCAT CAGCAGGAGT GGCAACGCTT CGAGCAGCGC CTGACGGCCC TTGAACAAGG CAAGGGCGAT GTCAGCGGCG GCGCGACCTT TCCCGGCGAT TATCGACGCC TCTGCCACCA TCTGGCGCTG GCACAGGAAC GCGGCTACAG CAGCCATCTG GTCGACCCCC TGCATCAGTT GGCCATGCGC GGTCATCAGC AACTTTACCG CCATCGCAGC ACTGCCGGAG TGCGACTGCT GAGCTTCGTT CTGGCAGACT TTCCGCGACG CGTGCGGGCC GAGTGGCGCT TTGTGCTGGT TGCCAGCCTG CTGCTGTTCG GTAGCCTGAT CGGCATGGCG TTGCTGGTCT ATGGTTTTCC ACAACTGATC TACAGCGTCG TCAGCCCCGA ACAACTGGCA GACATGCAGA GTATGTATGA CCCGTCGGCC AGTCGTGTCG GACAGCCCGT CGAACGGGGT TCCGATACGG ACTGGATGAT GTTCGGCTAC TACATCATGA ACAACATCGG CATCGCCTTC CAGACCTATG CCAGCGGCTT GCTGTTCGGG CTGGGCAGTC TGTTTTTCCT GCTCTTCAAC GGCTTGATGA CCGGCGCAAT CGCCGGGCAC CTGACAGACA TCGGTTACGG ACAGACCTTC TGGCCCTTCG TCATCGGTCA CGGCGCCTTC GAGCTGACGG CCATCGCTCT TGCCGGGGCT GCGGGCCTCA AGCTGGGCTG GGCCTTGCTG GCCCCCGGAC GGCTGACGCG CAGCGCCGCC CTGCGCATCG CCGCGCGGGC CAGCATGCAA CTGGTCGGCG GGGTGATCCT GTTTCTGCTG ATCGCAGCCT TCATCGAGGC GTACTGGTCA TCGATGACCT GGCCCGGGCC GCTTCTCAAG TACCTGACAG GTGCCGTCCT GTGGTTGCTG GTGGCCGCGT ATCTGACTCT GGCAGGACGT ACACCTCATG CGCCTGACTG A
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Protein sequence | MKQSLFETRH QQEWQRFEQR LTALEQGKGD VSGGATFPGD YRRLCHHLAL AQERGYSSHL VDPLHQLAMR GHQQLYRHRS TAGVRLLSFV LADFPRRVRA EWRFVLVASL LLFGSLIGMA LLVYGFPQLI YSVVSPEQLA DMQSMYDPSA SRVGQPVERG SDTDWMMFGY YIMNNIGIAF QTYASGLLFG LGSLFFLLFN GLMTGAIAGH LTDIGYGQTF WPFVIGHGAF ELTAIALAGA AGLKLGWALL APGRLTRSAA LRIAARASMQ LVGGVILFLL IAAFIEAYWS SMTWPGPLLK YLTGAVLWLL VAAYLTLAGR TPHAPD
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