Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3992 |
Symbol | |
ID | 3369528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4750621 |
End bp | 4751334 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637654350 |
Product | hypothetical protein |
Protein accession | YP_237060 |
Protein GI | 66047219 |
COG category | [R] General function prediction only |
COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.222479 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGTCTG TTTCACAGTG GATGCTGTAC ATGGTGATGC TGTTGGGAGG GGTATTGCGG GCCGAGGCAG AGCCATCAGC ACTGGTTTTT CCGCCGATGA CCGGCAGTGT GGTGGATGCC GCACAGATGC TCGACAGCCA GACTACGGTT CGTCTGGCCA GACTTCTGAG CGCCCATGAA AAGGCGACCG GGGAGCGGGT AGTGGTGGTG ACCCTCGCTG ATCTGCAGGG CACGAGCATC GAAGAGTTCG GCTCTCGACT CGGCGACGCC TGGGGCCTGG GGCTGCATGG CAAGGATGAC AGTGTTCTGC TGGTGGTCTA TCGCGACAAG CGCAAGGTGT TCATGGAGGT CGGCGGTGCG CTGAAGGACC GTCTCAACGA CGCCCAGGCG TCTCTGATCA TCGACATGCT GATGACCCCC GAGTTTGACG ACAACCGGTT TGCCGTCGGC ATAGAGCGCG GTACGCGCGC GGTCATCGCG GCATTGGGTG GGCAGATACC CGATTATCCC GAGCCGACAG GGCAGATGTC CGACTATGAC GAGCAGCCCG ATGACGACCA GGTCTGGCTG ATCGGTATCA TGTTGACCCT CATCGTGCTG GGGATTGTAA TCATGAGTGT CAGACGGGGC GGCGCCACCC GGCCCGCACG TGAAAGAGTC GCCGATCGCA GTGGCGGACG CTTCGGCGGT GGCGGTGCTT CAGGCAACTG GTAG
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Protein sequence | MKSVSQWMLY MVMLLGGVLR AEAEPSALVF PPMTGSVVDA AQMLDSQTTV RLARLLSAHE KATGERVVVV TLADLQGTSI EEFGSRLGDA WGLGLHGKDD SVLLVVYRDK RKVFMEVGGA LKDRLNDAQA SLIIDMLMTP EFDDNRFAVG IERGTRAVIA ALGGQIPDYP EPTGQMSDYD EQPDDDQVWL IGIMLTLIVL GIVIMSVRRG GATRPARERV ADRSGGRFGG GGASGNW
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