Gene Psyr_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3992 
Symbol 
ID3369528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4750621 
End bp4751334 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content61% 
IMG OID637654350 
Producthypothetical protein 
Protein accessionYP_237060 
Protein GI66047219 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.222479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGTCTG TTTCACAGTG GATGCTGTAC ATGGTGATGC TGTTGGGAGG GGTATTGCGG 
GCCGAGGCAG AGCCATCAGC ACTGGTTTTT CCGCCGATGA CCGGCAGTGT GGTGGATGCC
GCACAGATGC TCGACAGCCA GACTACGGTT CGTCTGGCCA GACTTCTGAG CGCCCATGAA
AAGGCGACCG GGGAGCGGGT AGTGGTGGTG ACCCTCGCTG ATCTGCAGGG CACGAGCATC
GAAGAGTTCG GCTCTCGACT CGGCGACGCC TGGGGCCTGG GGCTGCATGG CAAGGATGAC
AGTGTTCTGC TGGTGGTCTA TCGCGACAAG CGCAAGGTGT TCATGGAGGT CGGCGGTGCG
CTGAAGGACC GTCTCAACGA CGCCCAGGCG TCTCTGATCA TCGACATGCT GATGACCCCC
GAGTTTGACG ACAACCGGTT TGCCGTCGGC ATAGAGCGCG GTACGCGCGC GGTCATCGCG
GCATTGGGTG GGCAGATACC CGATTATCCC GAGCCGACAG GGCAGATGTC CGACTATGAC
GAGCAGCCCG ATGACGACCA GGTCTGGCTG ATCGGTATCA TGTTGACCCT CATCGTGCTG
GGGATTGTAA TCATGAGTGT CAGACGGGGC GGCGCCACCC GGCCCGCACG TGAAAGAGTC
GCCGATCGCA GTGGCGGACG CTTCGGCGGT GGCGGTGCTT CAGGCAACTG GTAG
 
Protein sequence
MKSVSQWMLY MVMLLGGVLR AEAEPSALVF PPMTGSVVDA AQMLDSQTTV RLARLLSAHE 
KATGERVVVV TLADLQGTSI EEFGSRLGDA WGLGLHGKDD SVLLVVYRDK RKVFMEVGGA
LKDRLNDAQA SLIIDMLMTP EFDDNRFAVG IERGTRAVIA ALGGQIPDYP EPTGQMSDYD
EQPDDDQVWL IGIMLTLIVL GIVIMSVRRG GATRPARERV ADRSGGRFGG GGASGNW