Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3974 |
Symbol | |
ID | 3369509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4721850 |
End bp | 4722632 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637654331 |
Product | ABC transporter |
Protein accession | YP_237042 |
Protein GI | 66047201 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.161065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTA TCAGTGTGCG CAATGTCTGG CAGCAATACG CCGACCAGGT GGTGCTCGAG GGCCTCAACC TGGACGTGGC CGAAGGCGAG TTCTGCACGC TGGTCGGCGC GTCGGGCTGC GGCAAGTCGA CCTTTCTGCG CCTGTTGCTG GGTCAGGAAT CCCCCAGTCG CGGTCTGATC ACGCTGGACG GCACGCCCTT GCGCAATGAG CCGGATGCCA GCCGTGGCGT GGTGTTTCAG CGCTATTCGG TATTCCCGCA CCTGTCGGTG CTCGACAACG TGGCGCTGGG TCTGGAGCTG CCCCGCTCGC CCTGGCTGGG CCGTCTGTTC GGCCAGGCAA AAGGCGAGGC CCGCGAGCAC GCCGCGCAGT TGCTCGGCAA GGTCGGCCTC GGGCATGCGC TGGACAAGTA TCCGACACAA TTGTCCGGCG GCATGCAGCA GCGCCTGGCC ATCGCCCAGG CGCTGATCAT GAAACCGCGC GTCCTGCTGC TGGACGAGCC GTTCGGCGCG CTCGACCCCG GCATCCGCAA GGACATGCAC CACCTGCTGC TGGACCTTTG GCGCGAAACG AAACTGACCG TGTTCATGGT TACCCACGAC CTGTCCGAAG GTTTCAACCT CGGCACCCGC CTGCTGGTTT TCGACAAGGT ACGCCACGAC CCGCACGCAC CCGGCGCCTA TGGCGCGCGC ATCACTTACG ACATCCCCCT CAACAGCGAA CGCCGCGCCG AGCGCGCCGC TATCGATTCG CTGCTCAACG TTTCAGAGGA GCCTGTTCAA TGA
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Protein sequence | MSFISVRNVW QQYADQVVLE GLNLDVAEGE FCTLVGASGC GKSTFLRLLL GQESPSRGLI TLDGTPLRNE PDASRGVVFQ RYSVFPHLSV LDNVALGLEL PRSPWLGRLF GQAKGEAREH AAQLLGKVGL GHALDKYPTQ LSGGMQQRLA IAQALIMKPR VLLLDEPFGA LDPGIRKDMH HLLLDLWRET KLTVFMVTHD LSEGFNLGTR LLVFDKVRHD PHAPGAYGAR ITYDIPLNSE RRAERAAIDS LLNVSEEPVQ
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