Gene Psyr_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3974 
Symbol 
ID3369509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4721850 
End bp4722632 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID637654331 
ProductABC transporter 
Protein accessionYP_237042 
Protein GI66047201 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.161065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTA TCAGTGTGCG CAATGTCTGG CAGCAATACG CCGACCAGGT GGTGCTCGAG 
GGCCTCAACC TGGACGTGGC CGAAGGCGAG TTCTGCACGC TGGTCGGCGC GTCGGGCTGC
GGCAAGTCGA CCTTTCTGCG CCTGTTGCTG GGTCAGGAAT CCCCCAGTCG CGGTCTGATC
ACGCTGGACG GCACGCCCTT GCGCAATGAG CCGGATGCCA GCCGTGGCGT GGTGTTTCAG
CGCTATTCGG TATTCCCGCA CCTGTCGGTG CTCGACAACG TGGCGCTGGG TCTGGAGCTG
CCCCGCTCGC CCTGGCTGGG CCGTCTGTTC GGCCAGGCAA AAGGCGAGGC CCGCGAGCAC
GCCGCGCAGT TGCTCGGCAA GGTCGGCCTC GGGCATGCGC TGGACAAGTA TCCGACACAA
TTGTCCGGCG GCATGCAGCA GCGCCTGGCC ATCGCCCAGG CGCTGATCAT GAAACCGCGC
GTCCTGCTGC TGGACGAGCC GTTCGGCGCG CTCGACCCCG GCATCCGCAA GGACATGCAC
CACCTGCTGC TGGACCTTTG GCGCGAAACG AAACTGACCG TGTTCATGGT TACCCACGAC
CTGTCCGAAG GTTTCAACCT CGGCACCCGC CTGCTGGTTT TCGACAAGGT ACGCCACGAC
CCGCACGCAC CCGGCGCCTA TGGCGCGCGC ATCACTTACG ACATCCCCCT CAACAGCGAA
CGCCGCGCCG AGCGCGCCGC TATCGATTCG CTGCTCAACG TTTCAGAGGA GCCTGTTCAA
TGA
 
Protein sequence
MSFISVRNVW QQYADQVVLE GLNLDVAEGE FCTLVGASGC GKSTFLRLLL GQESPSRGLI 
TLDGTPLRNE PDASRGVVFQ RYSVFPHLSV LDNVALGLEL PRSPWLGRLF GQAKGEAREH
AAQLLGKVGL GHALDKYPTQ LSGGMQQRLA IAQALIMKPR VLLLDEPFGA LDPGIRKDMH
HLLLDLWRET KLTVFMVTHD LSEGFNLGTR LLVFDKVRHD PHAPGAYGAR ITYDIPLNSE
RRAERAAIDS LLNVSEEPVQ