| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3935 |
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| Symbol | |
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| ID | 3369470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4680215 |
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| End bp | 4680976 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637654292 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_237003 |
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| Protein GI | 66047162 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0101675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTA AAGTTGCAGT GATAACCGGT GCCGCCAGTG GCATTGGTCA GGCCCTGGTA
GTGGCTTTTG CCCGCCAGGG GGTGGCGGTG GCAGGCGGGT TCTATCCGGC TGATCCGCAT
GATCCGGACG AAACCCGCAG GCTGGTGGCG GAGGCGGGCG GCGAATGCCT GATGCTGCCA
CTGGACGTGA CCTTCACCGA GTCGGTCGAT GACCTGGCCG CGCAGGCGGT CAAGGCATTC
GGCCGCATCG ACTACGCGGT TGCCAATGCC GGATTGTTGC GCCGCGCGCC GTTGCTGGAA
ATGACCGACG AGCGCTGGAA CGAGATGCTC GACGTCGACC TGACAGGCGT GATGCGCACC
TTCCGCGCCG CCGTCCGGCA CATGGGTGAG GGCGGGGCGC TGGTGGCGAT TTCCTCGATT
GCCGGTGGTG TGTATGGCTG GCAGGACCAT TCCCATTACG CAGCGGCCAA GGCTGGCGTA
CCAGGGCTGT GTCGGTCACT GGCGGTGGAG CTCGCAGCGA AGGGCATCCG TTGCAACGCG
GTGATTCCCG GTTTGATCGA GACGCCGCAA TCGCTGGACA GCACGAACTC GCTGGGGCCT
GAAGGTCTGG CGCAGGCGGC CAAAGCCATC CCGCTGGGCC GTGTCGGCCG GGCGGATGAA
GTCGCTGCGC TGGTGCGTTT TCTGTGCAGC GATGAAGCCA GTTACCTGAC CGGGCAAAGC
ATCGTGATCG ACGGTGGCCT GACCGTGCGC TGGCCCGAGT AG
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| Protein sequence | MTRKVAVITG AASGIGQALV VAFARQGVAV AGGFYPADPH DPDETRRLVA EAGGECLMLP
LDVTFTESVD DLAAQAVKAF GRIDYAVANA GLLRRAPLLE MTDERWNEML DVDLTGVMRT
FRAAVRHMGE GGALVAISSI AGGVYGWQDH SHYAAAKAGV PGLCRSLAVE LAAKGIRCNA
VIPGLIETPQ SLDSTNSLGP EGLAQAAKAI PLGRVGRADE VAALVRFLCS DEASYLTGQS
IVIDGGLTVR WPE
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