Gene Psyr_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3892 
Symbol 
ID3369427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4633473 
End bp4634690 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content58% 
IMG OID637654249 
Productargininosuccinate synthase 
Protein accessionYP_236960 
Protein GI66047119 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.141657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG TAAACAAGGT AGTTCTCGCG TATTCCGGTG GCCTGGATAC TTCGGTAATC 
CTCAAGTGGC TGCAAGATAC GTACAACTGC GAAGTGGTGA CCTTTACCGC TGACCTGGGT
CAGGGTGAAG AAGTCGAGCC GGCACGCGCC AAGGCTCAGG CCATGGGCGT GAAAGAAATC
TACATCGATG ACCTGCGCGA AGAGTTCGTG CGCGATTTCG TCTTCCCGAT GTTCCGTGCC
AACACTGTCT ATGAAGGCGA GTACCTGCTG GGTACCTCCA TCGCCCGTCC GTTGATCGCC
AAACGTCTGA TCGAGATCGC CAACGAAACC GGCGCTGACG CCATTTCCCA CGGCGCAACC
GGCAAGGGTA ACGACCAGGT ACGTTTCGAG CTGGGTGCCT ACGCGCTCAA GCCAGGCGTC
AAGGTCATCG CTCCGTGGCG CGAATGGGAT CTGCTGTCGC GTGAGAAACT GATGGACTAC
GCCGAGAAGC ACAACATTCC CATTGAGCGT CACGGCAAGA AGAAATCTCC GTACTCCATG
GACGCCAACC TGCTGCACAT CTCTTATGAA GGCGGCGTGC TGGAAGACAC CTGGACCGAG
CACGAAGAAG ACATGTGGCG CTGGACCAAG TCCCCTGAGG ACGCGCCAAA CGTTGCGACC
TACCTTGAGC TGACCTATCG CAATGGCGAC ATCGTTGCCC TGGATGGTGT CGAAATGACC
CCGGCCACTG TGCTCGCGAC CCTGAACCGC ATCGGTGGCG AAAACGGTAT CGGCCGTCTG
GATATCGTTG AAAACCGTTA TGTGGGCATG AAGTCCCGTG GCTGCTACGA GACGCCTGGT
GGCACCATCA TGCTGCGTGC TCACCGTGCC ATCGAGTCGA TCACCCTGGA CCGCGAAGTC
GCCCACCTCA AGGACGAACT CATGGCCAAG TATGCCAGCC TGATCTACAC AGGTTACTGG
TGGAGCCCTG AGCGCCTGAT GCTGCAGCAG ATGATCGACG CGTCCCAGGT TCACGTGAAC
GGCGTTGTGC GTCTGAAGTT GTACAAGGGC AATGTGATCG TCACCGGTCG CAAGTCGGAT
GATTCGCTGT TCGACGCCAA CATTGCCACC TTCGAAGACG ACGCAGGTGC CTACGATCAG
GCCGATGCAG CGGGCTTCAT CAAGCTCAAC GCATTGCGCA TGCGGATTGC CGCCAACAAG
GGCCGCAAGC TGTTCTGA
 
Protein sequence
MADVNKVVLA YSGGLDTSVI LKWLQDTYNC EVVTFTADLG QGEEVEPARA KAQAMGVKEI 
YIDDLREEFV RDFVFPMFRA NTVYEGEYLL GTSIARPLIA KRLIEIANET GADAISHGAT
GKGNDQVRFE LGAYALKPGV KVIAPWREWD LLSREKLMDY AEKHNIPIER HGKKKSPYSM
DANLLHISYE GGVLEDTWTE HEEDMWRWTK SPEDAPNVAT YLELTYRNGD IVALDGVEMT
PATVLATLNR IGGENGIGRL DIVENRYVGM KSRGCYETPG GTIMLRAHRA IESITLDREV
AHLKDELMAK YASLIYTGYW WSPERLMLQQ MIDASQVHVN GVVRLKLYKG NVIVTGRKSD
DSLFDANIAT FEDDAGAYDQ ADAAGFIKLN ALRMRIAANK GRKLF