| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3883 |
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| Symbol | dcd |
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| ID | 3369418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4624012 |
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| End bp | 4624578 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637654240 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_236951 |
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| Protein GI | 66047110 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.05326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.503358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCA AATCGGACAA GTGGATTCGC CGCATGGCGC AGGAACACGG GATGATCGAG
CCCTTCGTAG AGCGCCAGGT ACGTGGCGAA GGTGCTGATC GGGTGATCTC TTTCGGGGTG
TCCAGTTACG GCTACGACGT GCGTTGCGCC GACGAATTCA AGGTGTTCAC CAACATCAAT
TCGGCCACGG TCGATCCGAA AAACTTCGAT GAAAAAAGCT TCGTCGATAT CAAGAGCGAC
GTATGCATCA TCCCTCCCAA CTCGTTCGCA CTGGCGCGCA CCGTCGAATA TTTCCGCATT
CCGCGTAACG TTCTGACCAT CTGCCTGGGC AAGAGCACCT ACGCGCGCTG CGGCATCATC
GTCAATGTCA CGCCGCTCGA GCCTGAGTGG GAAGGCCATG TGACGCTGGA GTTTTCCAAC
ACCACGACAC TGCCGGCCAA GATCTACGCC AACGAGGGTG TGGCGCAGAT GCTGTTCCTG
GAGTCCGATG AGGAGTGTGA AGTCTCCTAC AAGGATCGGG GTGGCAAGTA CCAGGGCCAG
CGTGGCGTCA CCCTGCCGCG TACCTGA
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| Protein sequence | MSIKSDKWIR RMAQEHGMIE PFVERQVRGE GADRVISFGV SSYGYDVRCA DEFKVFTNIN
SATVDPKNFD EKSFVDIKSD VCIIPPNSFA LARTVEYFRI PRNVLTICLG KSTYARCGII
VNVTPLEPEW EGHVTLEFSN TTTLPAKIYA NEGVAQMLFL ESDEECEVSY KDRGGKYQGQ
RGVTLPRT
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