| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3786 |
|---|
| Symbol | |
|---|
| ID | 3369321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4501896 |
|---|
| End bp | 4502732 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637654144 |
|---|
| Product | RNA binding S1 |
|---|
| Protein accession | YP_236855 |
|---|
| Protein GI | 66047014 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.198165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0264698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAA TCGGGCGTTA CAACAGCTTG CAAATCGTCA AGCACACGAA CTTCGGTCTG
TATCTGGACG GTGCGCAGGA TGGTGAAATC CTGCTGCCCA ATCGGTACAT CCCCAAGGAC
GTTCCTACGG AAGATGAGGA CTGGCTCAAT GTGTTCATCT ATCTGGACAG CGAAGACAAG
CTGCTCGCCA CCACTGAAAA ACCCAAGGTG CAGGTCGGTG AGTTCGCCAG CCTGAAGGTG
GTTGAAGTCA ACAGCATCGG TGTATTCCTT GACTGGGGCC TGCCCAAGGA CCTGTTGCTG
CCGTACTCCG AAGAGAAGCG CACCTTGCAG GCCGGTGATT ACTGCGTGGT TCACGTCTAC
CTCGACAAAC ACACACGGCG CATTACCGCG ACTGCGCGTC TGGATCGCTA CCTGGACAAG
ACTCCCGCCA ACTACAGCGT GGGCCAGGAA GTCGATCTGC TGGTGGCTGA AGCGACCGAC
ATGGGCTTCA AGGCGATCAT CAACAACAAG CACTGGGGCC TGATTCACAA GAACGAAGTG
TTCAAGTTCA TGCGCGCCGG CAAGCAGGAA AAGGGTTACA TCAAGGAAAT TCGCAGCGAC
GGCAATATCA GCCTGAGCCT GCAACCCGTC GGTGCAGAGG CCGCGAGCAG CCTGAACTCG
AAGATTCTCA CCAAGCTGCG CGAGAACAAC GGCACGCTGC CGGTCAGCGA TAAAAGTGAT
CCGCAGGTCA TCAGCGGCCT GTTTGGCGTC AGCAAGGGCA ACTTCAAAAA GGCCATTGGT
GCGTTGTACA AGCAGGGCCA GATCGTGATT CACGCCGACC GTATCGAGCT GGTCTGA
|
|---|
| Protein sequence | MALIGRYNSL QIVKHTNFGL YLDGAQDGEI LLPNRYIPKD VPTEDEDWLN VFIYLDSEDK
LLATTEKPKV QVGEFASLKV VEVNSIGVFL DWGLPKDLLL PYSEEKRTLQ AGDYCVVHVY
LDKHTRRITA TARLDRYLDK TPANYSVGQE VDLLVAEATD MGFKAIINNK HWGLIHKNEV
FKFMRAGKQE KGYIKEIRSD GNISLSLQPV GAEAASSLNS KILTKLRENN GTLPVSDKSD
PQVISGLFGV SKGNFKKAIG ALYKQGQIVI HADRIELV
|
|---|
| |