Gene Psyr_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3771 
Symbol 
ID3369306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4490038 
End bp4491201 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content58% 
IMG OID637654129 
Producthypothetical protein 
Protein accessionYP_236840 
Protein GI66046999 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGAA AAAACCTGAT CGCGACATTG TGTACTGCAG CCATTCTGAG CCTGCCACTG 
ACGGCCAGCG CCGCTACGGA AACCTACAAA AGCGAACTGG GCACCGTCAC GGTGACCCCT
GTTGTCGAAG GTCTGGATCA TCCGTGGGCG CTGGCCTTTC TGCCTGACAG GCAAGGCATG
CTGGTGACAG AGCGTTCGGG CAACCTGCGC GTGGTATCGG CGGATGGCAA ATTGTCCGCA
CCGCTTTCCG GTGTCCCGCA AGTCTGGGCG CAGAAGCAGG GCGGTCTGCT TGATGTGGTG
CTGTCACCGG ACTTCGCCAA GGACCGCATG GTGTATCTGA CCTACTCCGA GGGCAGCGGC
AAGACCGCCG CCGAAGGTGA TACCGCCGGC ACTGCCGCAG GGCGTGGTCG TCTGTCCAAG
GACATGACTC GTCTGGAAGA CTTCGAAGTC ATCTTCCGCC AGGAACCGAA ACTGTCGGTG
GGCAACCACT TCGGCGCGCG GATGGTCTTC GATCGCGACG GTTACCTGTT CATCGCCCTG
GGCGAAAACA ATCAGCGCCC CACGGCGCAG GATCTGGACA AGCTGCAGGG CAAGATCGTG
CGCATCTATC CGGACGGCAG CGTACCGAAA GACAATCCGT TCGTGGGCCA GAAGGGCGTT
CGCCCCGAGA TATGGTCCTA TGGCCATCGC AATCAGCAGG GCGCCGCGCT CGACCCCTGG
ACCGGGACGT TGTGGACCAA CGAGCATGGC CCCAAGGGCG GTGATGAGCT GAATATCATC
GAGCGTGGCG CGAATTACGG CTGGCCGATC GCGACCCACG GTATCGACTA CTCGGGTCAG
CCGATTTCGG AGTCGAAGGG CAAGGTTGTC GAAGGAACCA AAATTCCGTT CCAGGTCTGG
GAAGTGTCAC CGGGCCTCAG TGGCATGGCG TTCTATGATC ACAGCCTTTT CAAGGCATGG
GATCACAGTG TATTCATTGG TGCGCTGGCC ACTGAAGAGT TGATCAGACT GCAGTTCGAA
AATGACAAGA TCGTTCATGA AGAACGTCTG TTGAAAGACA TGAAACAGCG CATACGTGAT
GTGCGTCAGG GGCCGGACGG TTACTTGTAT CTGTTGACCG ACGACGATAA GGGAAGTCTT
CTGAAAGTAG GCTTGGCCCA GTAA
 
Protein sequence
MLRKNLIATL CTAAILSLPL TASAATETYK SELGTVTVTP VVEGLDHPWA LAFLPDRQGM 
LVTERSGNLR VVSADGKLSA PLSGVPQVWA QKQGGLLDVV LSPDFAKDRM VYLTYSEGSG
KTAAEGDTAG TAAGRGRLSK DMTRLEDFEV IFRQEPKLSV GNHFGARMVF DRDGYLFIAL
GENNQRPTAQ DLDKLQGKIV RIYPDGSVPK DNPFVGQKGV RPEIWSYGHR NQQGAALDPW
TGTLWTNEHG PKGGDELNII ERGANYGWPI ATHGIDYSGQ PISESKGKVV EGTKIPFQVW
EVSPGLSGMA FYDHSLFKAW DHSVFIGALA TEELIRLQFE NDKIVHEERL LKDMKQRIRD
VRQGPDGYLY LLTDDDKGSL LKVGLAQ