Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3771 |
Symbol | |
ID | 3369306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 4490038 |
End bp | 4491201 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637654129 |
Product | hypothetical protein |
Protein accession | YP_236840 |
Protein GI | 66046999 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.185303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAGAA AAAACCTGAT CGCGACATTG TGTACTGCAG CCATTCTGAG CCTGCCACTG ACGGCCAGCG CCGCTACGGA AACCTACAAA AGCGAACTGG GCACCGTCAC GGTGACCCCT GTTGTCGAAG GTCTGGATCA TCCGTGGGCG CTGGCCTTTC TGCCTGACAG GCAAGGCATG CTGGTGACAG AGCGTTCGGG CAACCTGCGC GTGGTATCGG CGGATGGCAA ATTGTCCGCA CCGCTTTCCG GTGTCCCGCA AGTCTGGGCG CAGAAGCAGG GCGGTCTGCT TGATGTGGTG CTGTCACCGG ACTTCGCCAA GGACCGCATG GTGTATCTGA CCTACTCCGA GGGCAGCGGC AAGACCGCCG CCGAAGGTGA TACCGCCGGC ACTGCCGCAG GGCGTGGTCG TCTGTCCAAG GACATGACTC GTCTGGAAGA CTTCGAAGTC ATCTTCCGCC AGGAACCGAA ACTGTCGGTG GGCAACCACT TCGGCGCGCG GATGGTCTTC GATCGCGACG GTTACCTGTT CATCGCCCTG GGCGAAAACA ATCAGCGCCC CACGGCGCAG GATCTGGACA AGCTGCAGGG CAAGATCGTG CGCATCTATC CGGACGGCAG CGTACCGAAA GACAATCCGT TCGTGGGCCA GAAGGGCGTT CGCCCCGAGA TATGGTCCTA TGGCCATCGC AATCAGCAGG GCGCCGCGCT CGACCCCTGG ACCGGGACGT TGTGGACCAA CGAGCATGGC CCCAAGGGCG GTGATGAGCT GAATATCATC GAGCGTGGCG CGAATTACGG CTGGCCGATC GCGACCCACG GTATCGACTA CTCGGGTCAG CCGATTTCGG AGTCGAAGGG CAAGGTTGTC GAAGGAACCA AAATTCCGTT CCAGGTCTGG GAAGTGTCAC CGGGCCTCAG TGGCATGGCG TTCTATGATC ACAGCCTTTT CAAGGCATGG GATCACAGTG TATTCATTGG TGCGCTGGCC ACTGAAGAGT TGATCAGACT GCAGTTCGAA AATGACAAGA TCGTTCATGA AGAACGTCTG TTGAAAGACA TGAAACAGCG CATACGTGAT GTGCGTCAGG GGCCGGACGG TTACTTGTAT CTGTTGACCG ACGACGATAA GGGAAGTCTT CTGAAAGTAG GCTTGGCCCA GTAA
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Protein sequence | MLRKNLIATL CTAAILSLPL TASAATETYK SELGTVTVTP VVEGLDHPWA LAFLPDRQGM LVTERSGNLR VVSADGKLSA PLSGVPQVWA QKQGGLLDVV LSPDFAKDRM VYLTYSEGSG KTAAEGDTAG TAAGRGRLSK DMTRLEDFEV IFRQEPKLSV GNHFGARMVF DRDGYLFIAL GENNQRPTAQ DLDKLQGKIV RIYPDGSVPK DNPFVGQKGV RPEIWSYGHR NQQGAALDPW TGTLWTNEHG PKGGDELNII ERGANYGWPI ATHGIDYSGQ PISESKGKVV EGTKIPFQVW EVSPGLSGMA FYDHSLFKAW DHSVFIGALA TEELIRLQFE NDKIVHEERL LKDMKQRIRD VRQGPDGYLY LLTDDDKGSL LKVGLAQ
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