Gene Psyr_3751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3751 
Symbol 
ID3369286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4469613 
End bp4469807 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content56% 
IMG OID637654109 
Productcarbon storage regulator 
Protein accessionYP_236820 
Protein GI66046979 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.169624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTAC TGACGCGGGA AATTGGCGAA ACGTTTTCCA TTGGTGATGA CATCACCGTG 
CAGATTCTGG GCATCAACGG CAATCAGGTC AGGCTCGGGA TCAATGCCCC GAAAGACGTC
AAGGTTCACC GCGCCGAAGT CTACAAGCGA ATCGCCAGGA CGCTTGCGCA ACAGGCAACA
ACGCCGCTTC GGTGA
 
Protein sequence
MLVLTREIGE TFSIGDDITV QILGINGNQV RLGINAPKDV KVHRAEVYKR IARTLAQQAT 
TPLR