| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3653 |
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| Symbol | |
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| ID | 3369188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4338567 |
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| End bp | 4339493 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637654012 |
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| Product | GGDEF |
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| Protein accession | YP_236723 |
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| Protein GI | 66046882 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.203802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTC CTACCCAGAC CCATGCAATC GACTTCGATA CGGCTGAACT GCAACGCCTC
GGGTTTAGAA ATCGACCTGA CGCCGTGCTT CCACCCCCGT CACTGCCCGA GCTGATCTAC
CAGCTTGGGC GACAATTGCA GACCAGTCTG GAAGCCGAGC GGATACTGAC CCTGTTTTTT
CAGGGTGTAC AACGCTTCCT GCCATTGAGC GGTCTGATGT ATCGACATAT CGAAAGCGAC
TTGCAGCTGC GTCTGGGCGA GATGTCATCC GACAGCGCCA TTTTTCACCT GCGTCATGAA
GGCAAATGCA TCGGCGAACT GGAGTTTCAA GGCGCCAGGC CATTCGACAC GCGGCAATTG
AGCGACCTTG AATCGCTGCT GGTCTGCCTG GTGTACCCGC TGCTGAATGC GCTGCTGTAC
CGCATTGCCA CGCAAACTGC CCTGCGTGAT CCGCTGACCA GCACCGGCAA CCGCATCGCC
ATGGATCAGG GCCTGGCCCG AGAAATCGAA ATTTCACGGC GCCACAAGCA ACCGCTGTCA
CTGCTGATGC TGGATATCGA CCACTTCAAG AAAGTGAATG ATGAATACGG TCATCATACC
GGCGACGATG TGCTGAAAAC CGTTGCGCAG AGCCTGAAGG CGCAACTGCG CAATATTGAT
CGGGTGTTCC GCTACGGCGG TGAAGAGTTC GTGGTGATTC TGTCCAACAC CGGCGCCGAC
TCTGCCGAAC TGATTGGTCA GCGTCTGTGC CAGGCGGTGC GCAATCTCGA GTTTCGCGAA
CTCAGCCCGG CGTTGACCAT GACCGTGAGC CTGGGTTGCT CGACACTGCT GCCGACGGAA
ACAGCCGACA GCCTGCTGCG CCGTGCCGAT AATGCGCTGT ACGTCGCCAA ACGCGAAGGC
CGTAACCGTA TCGCCATGGC CAGCTAG
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| Protein sequence | MNFPTQTHAI DFDTAELQRL GFRNRPDAVL PPPSLPELIY QLGRQLQTSL EAERILTLFF
QGVQRFLPLS GLMYRHIESD LQLRLGEMSS DSAIFHLRHE GKCIGELEFQ GARPFDTRQL
SDLESLLVCL VYPLLNALLY RIATQTALRD PLTSTGNRIA MDQGLAREIE ISRRHKQPLS
LLMLDIDHFK KVNDEYGHHT GDDVLKTVAQ SLKAQLRNID RVFRYGGEEF VVILSNTGAD
SAELIGQRLC QAVRNLEFRE LSPALTMTVS LGCSTLLPTE TADSLLRRAD NALYVAKREG
RNRIAMAS
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