10 homologs were found in PanDaTox collection
for query gene Psyr_3609 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_3609  hypothetical protein  100 
 
 
252 aa  516  1.0000000000000001e-145  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.0064832  normal  0.347756 
 
 
-
 
NC_004578  PSPTO_1785  hypothetical protein  95.24 
 
 
256 aa  476  1e-133  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3837  hypothetical protein  69.84 
 
 
280 aa  335  5e-91  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_002947  PP_1878  hypothetical protein  69.84 
 
 
255 aa  332  3e-90  Pseudomonas putida KT2440  Bacteria  normal  normal  0.192229 
 
 
-
 
NC_010322  PputGB1_1453  hypothetical protein  69.44 
 
 
255 aa  332  5e-90  Pseudomonas putida GB-1  Bacteria  normal  normal  0.150556 
 
 
-
 
NC_007492  Pfl01_4191  hypothetical protein  71.03 
 
 
252 aa  324  7e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1487  hypothetical protein  67.06 
 
 
255 aa  324  8.000000000000001e-88  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_27590  hypothetical protein  57.71 
 
 
257 aa  296  2e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00959157 
 
 
-
 
NC_009656  PSPA7_2335  hypothetical protein  57.71 
 
 
257 aa  295  5e-79  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0156027  n/a   
 
 
-
 
NC_009439  Pmen_1915  hypothetical protein  58.27 
 
 
255 aa  281  5.000000000000001e-75  Pseudomonas mendocina ymp  Bacteria  normal  0.0846835  normal  0.46148 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>