| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3556 |
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| Symbol | alaS |
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| ID | 3369087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4235102 |
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| End bp | 4237801 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653911 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_236626 |
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| Protein GI | 66046785 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.118826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCCCT TTGCCGTCGC TACGTCATTT GACGTTTTGC ACTTGCCTCT GGCCGCAGTC
TCCGTGGAAG AACCTATGAA AAGCGCAGAA ATCCGTGAAG CCTTCCTTGG CTTCTTCGAA
GAGCAAGGCC ACACCCGTGT CGCTTCAAGC TCCTTGATTC CGGGCAATGA CCCAACCCTG
CTGTTCACCA ACGCAGGCAT GAACCAGTTC AAGGATTGCT TCCTGGGCCA GGAAAAGCGT
GCCTACACCC GCGCCGTTAC CAGTCAGAAA TGCGTGCGTG CAGGTGGCAA GCACAACGAC
CTGGAAAACG TCGGCTATAC CGCTCGTCAC CATACTTTTT TCGAAATGCT GGGCAACTTC
AGCTTCGGTG ACTATTTCAA GCGTGATGCC ATCACCTACG CCTGGACCTT CCTGACCTCC
GAAAAATGGC TCAACCTGCC CAAGGAAAAA CTCTGGGTCA CGGTGTACGC CACTGACGAC
GAAGCCTACG ACATCTGGAC CAAGGAGATC GGCGTGCCCG CCGAGCGCAT GGTCCGTATT
GGCGACAACA AAGGCGCACC GTACGCCTCC GATAACTTCT GGACCATGGG TGATACCGGC
CCGTGCGGTC CTTGCAGCGA GATTTTCTTC GATCACGGCC CGGAAATCTG GGGCGGCCCG
CCAGGCTCGC CGGAAGAAGA CGGCGACCGT TACATCGAAA TCTGGAACAA CGTATTCATG
CAGTTCAACC GGACTGCGGA TGGCGTGCTG CACCCGCTGC CGGCACCGTC GGTCGATACC
GGCATGGGCC TGGAGCGTGT CAGTGCGGTG CTGCAGCACG TGCACTCCAA CTATGAAATC
GATCTGTTCC AGAGCCTGCT GGCTGCGTCG GCCAAGGCCA TTGGTTGCAG CAATGACAAC
CAGGCTTCGC TGAAAGTCGT GGCTGACCAC ATCCGTTCGT GCGGCTTCCT GATCGCCGAC
GGCGTGCTGC CGTCCAACGA AGGGCGTGGT TATGTACTGC GCCGCATCAT TCGTCGCGCC
TGCCGTCACG GCAACAAGCT GGGTGCCAAG GGCAGCTTCT TCTACCAGAT CGTTGCCGCG
CTGGTTGCCG AGATGGGGTC TGCGTTCCCT GAGCTGGTGC AACAGCAGTC GCACATCGAA
CGCGTGCTGA AAGGCGAAGA GGAGCAGTTC GCCAAGACCC TCGAGCAAGG TCTGAAAATT
CTCGAGCAGG ATCTGGCCGA CCTCAAAGGC ACGGTGGTTC CGGGCGAAGT GGTGTTCAAG
CTGTACGACA CCTACGGTTT CCCGATGGAC CTGACCGGTG ATATCGCCCG CGAGCGTAAC
CTGACCCTCG ACGAAGCAGG CTTCGAGCGT GAAATGGACG CCCAGCGCGT GCGCGCCCGT
TCGGCCAGCT CGTTCGGCAT GGATTACAAC AGCCTGGTCA AGGTCGATGT GGCCACGCAG
TTTACCGGTT ACTCGGCGAC CACTGGCAGC GCCAGCGTCG TGGCCCTCTA TAAGGAAGGC
CAGTCGGTTT CTCACCTGAA TGAAGGCGAA GAGGGCGTGG TGATTCTCGA CATCACCCCG
TTCTACGCCG AGTCGGGCGG TCAGATCGGT GACAGCGGTT TCCTGCAGGC CGGTGACGCG
CGCTTTGACG TCAGTGATAC CACCAAGACC GGCGGTGCGT TCCTGCACCA CGGCGTTGTG
GCGTCCGGCA GCCTGAGCGT TGGCGCGCAG GTTGAAACAC AAGTGGCTGA TGAAGTTCGC
GATGCAACCA AATTGAACCA TTCGGCCACT CACTTGCTGC ACGCCGCATT GCGTCAGGTG
CTGGGTGAGC ACGTTCAGCA GAAAGGCTCG CTGGTCGACA GTCAGCGTCT GCGCTTCGAC
TTCAGCCACT TCGAAGCGAT CAAGGCCGAG CAACTGCGCG CGCTGGAAGA TATCGTCAAC
GCCGAAATTC GCAAGAACAC CGAGGTAATG ACCGAAGAAA CCGATATCGA CACGGCGAAG
AAGAAGGGCG CCATGGCGCT GTTCGGCGAG AAGTACGGTG ACAGCGTTCG TGTGCTGAGC
ATGGGCGGCG AGTTCTCCGT CGAGCTGTGC GGTGGCATTC ACGCCAGCCG TACCGGTGAC
ATCGCGCTGT TCAAGATCGT CAGTGAGGGC GGTGTTGCAG CAGGCGTGCG CCGTATCGAG
GCCGTCACCG GCGCTGCGGC CCTGGCCTGG CTGAATTCGG CCGAAGATCA ACTCAAGGAA
GCCGCGACGC TGGTCAAAGG CAATCGCGAC AACCTGCTGG ACAAGCTGAC GGCGGTGATT
GAACGCAACC GTCTGCTGGA AAAACAACTG GAACAACTGC AAGCCAAGGC AGCCAGTGCC
GCCGGTGACG ACCTGTCGTC AGCGGCGCTG GATGTCAAAG GGGTCAAGGT TCTGGCCACG
CGCCTGGATG GTCAGGACGG CAAGGCGCTG TTGGCGCTTG TCGATCAGTT GAAGAACAAG
CTCGGCCGCG CAGTGATCCT GCTCGGCAGT GTTCATGAGG ACAAGGTTGT CTTGGTCGCA
GGCGTGACCA AGGACCTGAC TGGCCAACTC AAAGCCGGTG ATTTGATGAA GCAGGCAGCT
GCCGCCGTGG GTGGTAAAGG TGGTGGTCGT CCTGATATGG CTCAAGGCGG TGGTGTCGAT
GCCGGTGCGC TGGATTCAGC GCTGGCACTG GCCGTTCCTT TTGTAGAGCA GGGTATCTGA
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| Protein sequence | MRPFAVATSF DVLHLPLAAV SVEEPMKSAE IREAFLGFFE EQGHTRVASS SLIPGNDPTL
LFTNAGMNQF KDCFLGQEKR AYTRAVTSQK CVRAGGKHND LENVGYTARH HTFFEMLGNF
SFGDYFKRDA ITYAWTFLTS EKWLNLPKEK LWVTVYATDD EAYDIWTKEI GVPAERMVRI
GDNKGAPYAS DNFWTMGDTG PCGPCSEIFF DHGPEIWGGP PGSPEEDGDR YIEIWNNVFM
QFNRTADGVL HPLPAPSVDT GMGLERVSAV LQHVHSNYEI DLFQSLLAAS AKAIGCSNDN
QASLKVVADH IRSCGFLIAD GVLPSNEGRG YVLRRIIRRA CRHGNKLGAK GSFFYQIVAA
LVAEMGSAFP ELVQQQSHIE RVLKGEEEQF AKTLEQGLKI LEQDLADLKG TVVPGEVVFK
LYDTYGFPMD LTGDIARERN LTLDEAGFER EMDAQRVRAR SASSFGMDYN SLVKVDVATQ
FTGYSATTGS ASVVALYKEG QSVSHLNEGE EGVVILDITP FYAESGGQIG DSGFLQAGDA
RFDVSDTTKT GGAFLHHGVV ASGSLSVGAQ VETQVADEVR DATKLNHSAT HLLHAALRQV
LGEHVQQKGS LVDSQRLRFD FSHFEAIKAE QLRALEDIVN AEIRKNTEVM TEETDIDTAK
KKGAMALFGE KYGDSVRVLS MGGEFSVELC GGIHASRTGD IALFKIVSEG GVAAGVRRIE
AVTGAAALAW LNSAEDQLKE AATLVKGNRD NLLDKLTAVI ERNRLLEKQL EQLQAKAASA
AGDDLSSAAL DVKGVKVLAT RLDGQDGKAL LALVDQLKNK LGRAVILLGS VHEDKVVLVA
GVTKDLTGQL KAGDLMKQAA AAVGGKGGGR PDMAQGGGVD AGALDSALAL AVPFVEQGI
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