Gene Psyr_3502 details

Gene Information

• Locus tag: Psyr_3502
• ID: 3369029
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: +
• Start bp: 4173615
• End bp: 4177013
• Gene Length: 3399 bp
• Protein Length: 1132 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637653853
• Product: hypothetical protein
• Protein accession: YP_236572
• Protein GI: 66046731

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.990422
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCGACA AATCCGGCAC CCATACTCAA CGACGTGCTG CAACGTTCGC CAAGACACCC 
GCCACGGCCA CCAGCCTGTG TCCCTTCCGC GGACCTGACA TCGCCATCGT GCCAGTGCGC 
TACGCGCTGG ATCGCTCCCG CTACGATACC GCGCCCGAGA AGCTCAAGCC GCTGCTCAAG 
GGCAGCCGCT GGGCGGTGAT GCCGAAGCTG AAAACACGCA GCTATACCCT TCGCCAACTG 
TATGACGGTT ACGTGTATGT CTATGACGAA ACGGCCGGGA CCTTTCATGA GTACGTCTCG 
TCAGCTGCCG ATGGTCATCT GAGCCGCATC ATCTGGACAG ACGCACAGAT CGGCAGTGAC 
CAGCGCAGTG GCGGCAGCGA TGCCAAGCCT TTTCTGCTGT ATCCGCGAAG CAATCTGCTG 
CGCATCGCCT TTTCAGCACA GCAGTGGACC TGGAGAATCT GCGAACACCT GCGCTCCAAT 
CCGGCAAGCC GCACTTCATG GATGAAAGCG CTGGATCTGA AACGCTACTG CATGACCATG 
GCCGAGCCGG ATACCTTGCC GTTGAACCGT ATAGCCGAAG CGGTGGCGGA CATCGACAAG 
GAGTATGTGG TCGATGATGA CCGGTTTTCA GACTCGGCGA TTCCTGCTGC TCGCCCGCCT 
TCGGATAGCG ATGAAGTTAA GGCACTGTTT TCGCCAATCG GCGCCGACGT TTTCTGGCAG 
GGCAGCGTTG AAGACAAGAA CAGCTCCCTG CTCATTGCTC TTGATGATCC ACTGGCCATT 
TTCAATGATC TGGGCATGCA ACTGGCCGCC GATCAGGCCG CTTACCGCAA CTGGCAAGCC 
GAACACGAAC ACAAGATCCA GATTGCCCAG ACCGTCACCA CGCTATGTGG CGCTGAAAGT 
GAACCGGAGA AACTGCCGGC ATCGGTACGC GGCAATGCGG CGCTCACCCA TCAGTACCTG 
AGCGACGTCG AAGCCTATTT TGAACAATGC ATGTTTGAAC AAGAGCAGAT CGGCAACAAC 
ACCGCTCCCG GAGGCGTGCT ATTGCTACCG GATATTTTCA AGAGTCCGCA GATGCGCAGA 
TCGCTTGAAA TGCGATACGG CAGCGCGCCC TCCGACGATG CCCTGCAAGC CTGGAAAGAG 
CGCCACAAAT GGCGGCGCGA GGTCGACCTG AGCGGCGCGC GTCAGTACCT TCAGCAGCAC 
CTGCCGACCG GCGACACACT GCTGAAACAG GTGCGTGACA CGCAAAGCGA TTTCCAGCAA 
TGGACGACCC ATCTGGGTAC GGAACCCCTC AAGCTGTTTG TCGACACCGC ACACCCTGAA 
AGCCTGCTTT ATCTGCAAAC GGTCATGCTC AATCTGCAGA TCATCTACGC TCAGGACAAC 
GCCGCCAGCG CCTGGCTTGC CGAGCAGGAA GCCAACGACA GCAGCCTGTT TGGCACGTTG 
CGCTACGGCT TCTCACCGGC GCTCAAGCAC GCGCTGCACC AGGAGGCCAA CGCGCTGCTG 
AACGGCCTCG GCGACATCAC CAACCTGGCC ACCCGCATCG GTGAACTCAA CGGCACGCTC 
AATCACCAGG GCTTTGCCGA AAAGCCGTGG ATGAAGGCGC TGAAACAACC CGTTCAGGAC 
ACCTTCAAGG CCCTCGGCCA ACTGGCCAGC GATGCTGGCA AGGCAACGTT CGAAAGCATC 
CTGCTGGCCT GGGTGCCCAT TGACAGCCGC CTGGCAGTGG GCAAGCAGCA GAACATCGTC 
GCTCTGATTC GCACACTGTT GATCGGCCAG ATTTTGCTCG ACTCAAAGGC GCGTATTGCA 
ATCGATCACA CAATGCTCGC GAAGCTGAAA AACTGGATCA GTGAGTGGCA GGTACTCAAC 
AAACAGATCA GCGATACCCG TCGCAGCTGG CTCTACCCAA CCGCTTACAC CCCCCGCAAA 
AGCATCGCCA GCCACCTGCG CACCCTCGAG GAAAAACTTC GCCGGCACGA ACTGAGCATG 
CCCGCCCTGC TCGACTTTCA AAACAACCAA TACGCCAAGC AGTTGCAGGA TGAGATTCGC 
CTGCACTTCC AGTCCGGCAA AGCCATCACC AAAGAATGGC TGAGCACCGC CAGGCGCTGG 
CTCGATGGAC TGGGAGGCAT TGCCGGCTCG ATTACCTGGG GCGTGATCAT GCTCAACTTC 
ATCAACACCG CCTTTACCTA TCGCGACCTT ACTCGGGACG GAAACTTCAG CACCAAGGAC 
ATCGGTAAGG TGACGTATGG GTTGGGGTAT AGCTTTAACT TATTGATGGC TGTGTTTGTT 
GAAGCGCCGT GGGCGGTTAT CAGTACGGCC AAGCCTCTTT CCATTGGCGG CTATGACATA 
GGCATTCTCG ATAAGTCGGC GGCTTACTGG AAAGCACGGG GTAATGCGGT TTGGGGGGAT 
GCGATAAGGG GATTTAGAGT TTCAATGGTG GCAATGGGTG GGTTTGGACT CGCGGCAGTT 
ACGCTTGAAA TATTTGATGT TGCAGATGAC TTTTACGCAG CAAAAACACC AGAAGAAAAG 
AACGTAATCA TTGTAAAAGG CATTTCTGTG TTCACAATGG GAGTGGGCTC AACTTTTCAA 
TTGATGGGAG GATTATCGCC TGCCAGTGCA TTCGCGACTG TTGCGATGAG TTCCTGGTTT 
AGTGTGGCGC TACTCATAAT AGGCTCTATT TATCTTTTCA CTACGATGAC CCTGAATTAT 
TTCAAACAAG ACATTGTTGG CTGGTGGCTA CGCAAGTGCT GTTGGTCAAG AACCCTAGAC 
TATCGCTACG CTGAGACTGC CAAAGGTGAG CATGAAGAAG TTCGCGCACT GATGGAAATT 
CAATTGTCTC CGCAGGTTCA TGTAAAAAGC ACCGAGCATT ATGAAAACCG TTATCTAGGT 
AAAGGAGATC ACTACAGCGT AGCGGTACAA AATGGCGTTG GAGTACAAGT GCACTTGCCC 
AACCTGATAC GCGGGCAGTC CGTGCACTTC AACATCGTCA GCAGCAAGCG ACCATGGGGA 
GTGCTACCTG TAGAAAAAAT AGACGATCCG CTGCATCAAG CTTTTCTGGA CCGCGGGCAA 
TTCAGGGAAG TCGAACAGTT CGGGAAGCTA ACCAACACGC CTTCTGGCAA GGCGAGTGAA 
GACCTCACCT ACCCTCTCAT GCCACCAGAA AATGAAGACC TCATCTGGGA AACCTGGGTG 
CCACTGGACA AGGACGCAAC GTATATCGAG CTGCAAATCT GGTATCCGGC TAATCTTTTA 
AACCCTGGCG AGGACGATAG AAGCTATCTA TTTCAGATGG AGCTTGGCCC AAGAGGCGAT 
ACCGCCATTG ACGGACTGGC TGCAGTGGAA CTTGAAGTGA AGGCATCAAA CAGGGCCGGT 
ACGCTGACTC TAGAAGTCGC AGAGGGCACG CCATTATGA 

 

Protein sequence

MTDKSGTHTQ RRAATFAKTP ATATSLCPFR GPDIAIVPVR YALDRSRYDT APEKLKPLLK 
GSRWAVMPKL KTRSYTLRQL YDGYVYVYDE TAGTFHEYVS SAADGHLSRI IWTDAQIGSD 
QRSGGSDAKP FLLYPRSNLL RIAFSAQQWT WRICEHLRSN PASRTSWMKA LDLKRYCMTM 
AEPDTLPLNR IAEAVADIDK EYVVDDDRFS DSAIPAARPP SDSDEVKALF SPIGADVFWQ 
GSVEDKNSSL LIALDDPLAI FNDLGMQLAA DQAAYRNWQA EHEHKIQIAQ TVTTLCGAES 
EPEKLPASVR GNAALTHQYL SDVEAYFEQC MFEQEQIGNN TAPGGVLLLP DIFKSPQMRR 
SLEMRYGSAP SDDALQAWKE RHKWRREVDL SGARQYLQQH LPTGDTLLKQ VRDTQSDFQQ 
WTTHLGTEPL KLFVDTAHPE SLLYLQTVML NLQIIYAQDN AASAWLAEQE ANDSSLFGTL 
RYGFSPALKH ALHQEANALL NGLGDITNLA TRIGELNGTL NHQGFAEKPW MKALKQPVQD 
TFKALGQLAS DAGKATFESI LLAWVPIDSR LAVGKQQNIV ALIRTLLIGQ ILLDSKARIA 
IDHTMLAKLK NWISEWQVLN KQISDTRRSW LYPTAYTPRK SIASHLRTLE EKLRRHELSM 
PALLDFQNNQ YAKQLQDEIR LHFQSGKAIT KEWLSTARRW LDGLGGIAGS ITWGVIMLNF 
INTAFTYRDL TRDGNFSTKD IGKVTYGLGY SFNLLMAVFV EAPWAVISTA KPLSIGGYDI 
GILDKSAAYW KARGNAVWGD AIRGFRVSMV AMGGFGLAAV TLEIFDVADD FYAAKTPEEK 
NVIIVKGISV FTMGVGSTFQ LMGGLSPASA FATVAMSSWF SVALLIIGSI YLFTTMTLNY 
FKQDIVGWWL RKCCWSRTLD YRYAETAKGE HEEVRALMEI QLSPQVHVKS TEHYENRYLG 
KGDHYSVAVQ NGVGVQVHLP NLIRGQSVHF NIVSSKRPWG VLPVEKIDDP LHQAFLDRGQ 
FREVEQFGKL TNTPSGKASE DLTYPLMPPE NEDLIWETWV PLDKDATYIE LQIWYPANLL 
NPGEDDRSYL FQMELGPRGD TAIDGLAAVE LEVKASNRAG TLTLEVAEGT PL