Gene Psyr_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3489 
Symbol 
ID3369016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4158023 
End bp4158490 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID637653840 
ProductFlgN 
Protein accessionYP_236559 
Protein GI66046718 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.459728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA CTACTTTGCT GCAGATGATC ACTGACGACA TGGTTTCGGC CCGACAGCTT 
CTTGAGCTGT TGCAGGCCGA ATCACTGATT CTTCACGGCC GCGACATGGG CGAGATGGAG
CAGGTGCTGG CGCAGAAACA GGCGCTGGTC ATTCTTCTCG ACCAGCATGG TCGCAAACGT
AGCCAGGTGC TTGCGGGCAT GGGGCTGCCT GCCAATCGCA GTGGTCTCCA GCAACTGGCC
AGCCAGTCGG ATATCGGTGA GCAACTGCTG CTGGCCGCCG ACGAACTGAA CACGTTGATC
AACGAATGCC AGACGCTCAA CGAGCGCAAT GGTAGTCTGA TCCAGTTGCA ACAGGTCAGT
ACCGCTCACC AGCTTCGCAT CCTGAACGGT GGCGATACGC CTACACTCTA TGACAGCCGC
GGATCGACTG CGCTTAGAGC AAAACCACGC CCTCTGAGCC AGGCGTAA
 
Protein sequence
MQDTTLLQMI TDDMVSARQL LELLQAESLI LHGRDMGEME QVLAQKQALV ILLDQHGRKR 
SQVLAGMGLP ANRSGLQQLA SQSDIGEQLL LAADELNTLI NECQTLNERN GSLIQLQQVS
TAHQLRILNG GDTPTLYDSR GSTALRAKPR PLSQA