Gene Psyr_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3407 
Symbol 
ID3368934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand+ 
Start bp4068363 
End bp4068908 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content51% 
IMG OID637653758 
Producthypothetical protein 
Protein accessionYP_236477 
Protein GI66046636 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.109169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.498706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAA AAGAGTTTAC GATGGATAAA GAACAATCCA CGGATGTAGC GGCGCGCACC 
CAAAAAGAAC AAAACAATCC CGACAGCGCG AGCACTGTTC AAGAAGCCCC ACCCCACCAG 
AGCCTCTACC GACACGCGAG CCCCCTCCAT CTTCCATCCG ATATTTCCGA CACGCTGAAA 
GCACCTGTGC TGCCTGACAT CGATCCTGAT TCCATCAGTC ACGAACAGGC ACATGCGGGC 
ATTACCATTC ATATCCCAGG GTCAGTCAAA ATGTGCTGGG GTGACGAAAT CCGTTTTTAT 
TGGGGAAAAA ACCTGTCATC GACCACGCTT TTCCATCGGG TGGGCGAAAA CAGCGTGATA 
CGTGTGCTGT GTATTTCCTA CACTTTCACG CCCTATGTTC AGTACGGTCT GGTTGACCTG 
TATTACGAAC TTTATCGTGA TCATCGACGG ATCGGCACAT CGCCAGTGCT GCGGGTAAAC 
GTCAACTACG CGGTGCCTGT CACCTCCCGA CAGAGACAAC GCAAACGCAG GTTTACCGAT 
CAATAA
 
Protein sequence
MSIKEFTMDK EQSTDVAART QKEQNNPDSA STVQEAPPHQ SLYRHASPLH LPSDISDTLK 
APVLPDIDPD SISHEQAHAG ITIHIPGSVK MCWGDEIRFY WGKNLSSTTL FHRVGENSVI 
RVLCISYTFT PYVQYGLVDL YYELYRDHRR IGTSPVLRVN VNYAVPVTSR QRQRKRRFTD 
Q