Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3336 |
Symbol | |
ID | 3368863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3991328 |
End bp | 3992344 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653687 |
Product | LacI transcriptional regulator |
Protein accession | YP_236406 |
Protein GI | 66046565 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00746988 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATACGCA TTGGTTCCCG CTCGACCGGT CGCCCCACGC TCAATGAAGT GGCGAAGCTG GCTGGCGTCT CTCCGATCAC CGCTTCGCGT GCGTTGCGCG GGATCAGCAC CGTAGCGCCT GAACTCGTCG AAAAGGTCCG CGCTGCGGCG CAGAGCCTGG GTTATGTAGC CAACCCGGCA GCCAGGGCGC TGGCTTCTTC CTGCAGTCAG ACCGTCGTGG TGCTGGTGCC ATCGCTTTCC AACCAGCTGT TCATCGAGAC GCTGGAAGCC ATTCAGGACG TGTTGCGCGT GCGTGGCCTG GACGTGCTGA TCGGCAACTA CCATTACTCG CCCGAAGAGG AAGAGAAGCT GCTGCGCAAC CATCTGGTCA ATCGCCCGCG CGGTATTCTG CTGACCGGTT TCGACCACAC GGCAGCGTCC CGCCAGATGC TTGAAACCAG TGGTATACCC TGCGTGCACA TGATGGAACT CGACACCCGC CTGGGCGCTT ATTGCGTCGG ATTCTCGCAA CAACAGGCCG GCGCCGAAGC CGCGCATCAC CTGCTCGGGC GTGGCCGCCG TCGGCTGGCG TACATGGCCG CCCAGCTCGA CCCTCGGGTA CTGCAACGTG GCGAAGGGTT CCGTCGAGTG CTGGAAAGCG CGGGGCTGTT CGACCCGGCG CTGCAGGTCT CGACCCGCCA GGCCTCCTCG ATCGGTCTGG GCGGGGAGTT GTTCGCGCGT CTGCTTGACC AGCATCCGGA TGTCGACGGG GTGTTCTTCT GTAACGACGA CCTGGCGCAG GGCGCTGCAC TTGAGGCCTT GCGCCTGGGC GTCGCGATTC CCGAACGGGT CTCTCTGGTG GGTTTCAACG ACCTGCCGGG GTCCGCGCAC ATGGTGCCGC GCCTGACCTC GATACGCACG CCCCGGGAAG AAGTCGGGCA GCGTGCGGCT CAGGTATTGC TGGGCCTGCT TGACGGGATC TCCCAGCATC CACAGGTGGA TCTCGGGTTT GAGCTGGTGG TGCGGGAAAG CTCTTGA
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Protein sequence | MIRIGSRSTG RPTLNEVAKL AGVSPITASR ALRGISTVAP ELVEKVRAAA QSLGYVANPA ARALASSCSQ TVVVLVPSLS NQLFIETLEA IQDVLRVRGL DVLIGNYHYS PEEEEKLLRN HLVNRPRGIL LTGFDHTAAS RQMLETSGIP CVHMMELDTR LGAYCVGFSQ QQAGAEAAHH LLGRGRRRLA YMAAQLDPRV LQRGEGFRRV LESAGLFDPA LQVSTRQASS IGLGGELFAR LLDQHPDVDG VFFCNDDLAQ GAALEALRLG VAIPERVSLV GFNDLPGSAH MVPRLTSIRT PREEVGQRAA QVLLGLLDGI SQHPQVDLGF ELVVRESS
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