| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3326 |
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| Symbol | |
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| ID | 3368853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 3977795 |
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| End bp | 3979099 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653677 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_236396 |
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| Protein GI | 66046555 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0214185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCC ACTCCAGTTC CGACGCATTG GTTTATCAGT CGGGCTTTGG CAACCAGTTC
AGCAGCGAGG CGCTGCCCGA CGCGCTGCCC GTTGGCCAGA ATTCGCCGCA AAAGCATCCT
CTGGGTCTGT ATGCCGAGCA GTTTTCGGGC ACCGCATTTA CGGTCGCGCG CAGCGAAGCC
CGACGTACCT GGCTGTATCG GATCAAGCCA TCGGCAGCCC ATTCGCGTTA CCAGCGCATG
GATCGGCAGA TGGCCGGTCA GGAGCCGGGG CCGATCAACC CCAACCGGTT GCGCTGGAAT
GCCTTCGATA TCCCCGCGGC ACCGACCGAT TTCATTGACG GTCTCATCCC CCTCGCCAGC
ACCTCGGCGG CAGAGCAGGC TGAGGGTGTC AGCGTTTACC TGTACACCGC CAACACCTCC
ATGCAGCGAG CGTTCTTTAG TGCGGATGGA GAATGGCTGG TGGTGCCGCA GCAGGGCCGA
CTCAGAATCG TCACCGAACT GGGCTTGCTG GACATCGAAC CCCTGGAAAT CGCCGTCTTG
CCGCGAGGTT TGAAGTTCTG CGTCCAACTG CTCGACAGCA GCGCCCGTGG GTACCTCTGC
GAGAATCACG GTTGCGCCTT GCGCCTCCCG GAACTGGGCC CGATCGGCAG CAACGGGCTG
GCCAACTCAC GTGATTTTCT GACCCCGGTT GCCTGGTTTG AAGACAGTCG CCAGCCGATG
CAACTGGTGC AGAAGTTCCT CGGTGAGCTG TGGTCGACGC AACTGGAGCA CTCACCCTTT
GACGTGGTGG GCTGGCACGG CAACAACGTT CCGTACAAGT ACGACCTGCG GCGTTTCAAC
ACGATCGGTA CGGTCAGCTA CGATCACCCG GACCCATCGA TTTTCACCGT ACTCACCTCA
CCGGGGGCTA TTCATGGCCA GGCTAATATC GATTTCGTGA TCTTCCCGCC GCGCTGGATG
GTGGCGGAAA ACACCTTCCG TCCGCCGTGG TTCCACCGCA ACCTGATGAA CGAATTCATG
GGCCTGATCG ACGGCGCGTA CGACGCCAAG GCCGAAGGTT TCATGCCCGG TGGCGCTTCG
CTGCACAACT GCATGAGTGC GCACGGCCCC GACAATGTTA CCGCCGAAAA AGCCATTGCT
GCCGAGCTGA AACCGCACAG GATCGACAAC ACCATGGCCT TCATGTTCGA AACCGGCAAG
GTATTGCGCC CCAGTCGTCA CGCGCTCGAC TGTCCGCAAC TGCAAACCGA TTACGATGCC
TGCTGGAAGG ATATGGCCAG GACGTTCACC CAGGAGCCAC GCTGA
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| Protein sequence | MAIHSSSDAL VYQSGFGNQF SSEALPDALP VGQNSPQKHP LGLYAEQFSG TAFTVARSEA
RRTWLYRIKP SAAHSRYQRM DRQMAGQEPG PINPNRLRWN AFDIPAAPTD FIDGLIPLAS
TSAAEQAEGV SVYLYTANTS MQRAFFSADG EWLVVPQQGR LRIVTELGLL DIEPLEIAVL
PRGLKFCVQL LDSSARGYLC ENHGCALRLP ELGPIGSNGL ANSRDFLTPV AWFEDSRQPM
QLVQKFLGEL WSTQLEHSPF DVVGWHGNNV PYKYDLRRFN TIGTVSYDHP DPSIFTVLTS
PGAIHGQANI DFVIFPPRWM VAENTFRPPW FHRNLMNEFM GLIDGAYDAK AEGFMPGGAS
LHNCMSAHGP DNVTAEKAIA AELKPHRIDN TMAFMFETGK VLRPSRHALD CPQLQTDYDA
CWKDMARTFT QEPR
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