Gene Psyr_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3321 
Symbol 
ID3368848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3972243 
End bp3973178 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content59% 
IMG OID637653672 
Producthelix-turn-helix, Fis-type 
Protein accessionYP_236391 
Protein GI66046550 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.270973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACA GTAATGCCCT GAGAAAGCTG GACATGCAGG ACCTCATGGT CTTTGTCTCG 
GTGTATGAGC AGCGCAACCT GACCCTGGTC GCGGAAGCGT TGCATGTCAG CCAGTCGACG
GTCAGTTACT GCCTGAAAAA GCTGCGTGCC AACTTCGAGG ACGATCTGTT CATCTGCACC
CGCAACGGCA TGCGTCCGAC CCGCAAGGCG TTGGCCATGC ATGACCATGT GCAGCAGATT
CTCCGCTCGG TCAACCTGTG TCATGACGGT CTCGATCTGT TCGACCCGAC TCGCGCACAG
ACCACCTTCA CGGTCTGCGC GCCTGAGTAT TTCGAGCTGC TGGTATTGCC GCATTTGCTG
CGTGACTTCG TTGCAGCCGG CTTCTCGGTG ACGGTCAATG TGCAAAAGCT GGAGAAGCAG
TTGCCTGCCG AGCAATTGAA CGACGGTCTG TTTGACCTCG CCCTGTGCTT CGGGCCTGGC
TTTCACCGAG TCCCGGACAG CCTGATTTCG CAGGTGTTGA TGGAGGATGA TCTGGTTTGC
ATCATGGACT CACGGTTCGC GCCGGTCAGC GCCCTGATCG ACCTGCAAAC CTTCATCCGG
CACCGTCATG TCTACCCGAC GCCTTGGACG TCCGACACCA ACATGGTGGA TGGCTGGCTG
CAGCGCCAGG GGCTTGAGCG CCACATCGTC GCGCGCGCCA ACAGCTACCG GGCGGCATTG
CAATTGCTGG AAGGCACCGA TTTCATTCTG GTTCTGCCAC GCCGTATTCA GACGCTGCTG
GGCAATGAGC CGTGGATTTG CGTATTCGAA CTGCCACCTG ACTTGCCCGG CTTCAGTCTG
GATATGCTGT GGAGCGCCCA GGCGGATCGA GACGAAGCCA GTGGCTGGCT GCGTGAACAA
GTCGTGAAGG TGTGTGCCGA GCGCGGCTTG CTCTGA
 
Protein sequence
MLNSNALRKL DMQDLMVFVS VYEQRNLTLV AEALHVSQST VSYCLKKLRA NFEDDLFICT 
RNGMRPTRKA LAMHDHVQQI LRSVNLCHDG LDLFDPTRAQ TTFTVCAPEY FELLVLPHLL
RDFVAAGFSV TVNVQKLEKQ LPAEQLNDGL FDLALCFGPG FHRVPDSLIS QVLMEDDLVC
IMDSRFAPVS ALIDLQTFIR HRHVYPTPWT SDTNMVDGWL QRQGLERHIV ARANSYRAAL
QLLEGTDFIL VLPRRIQTLL GNEPWICVFE LPPDLPGFSL DMLWSAQADR DEASGWLREQ
VVKVCAERGL L