Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3305 |
Symbol | |
ID | 3368832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3955601 |
End bp | 3956779 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637653656 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_236375 |
Protein GI | 66046534 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0317499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.753589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATAG CGTTGCTTGC GCCGCTGCCA CCCGAACAGA ACGGCATCGC CGATTACGCC GGACATCTGC GGCATGCGCT TGAAGGCCTG GGTCTGCAGA TCAGTACACC GCTGCAAGGC GTCGGCAACG ATCCACGCGC TGCAGAACAG CGCGTGGCTG AAACGGACTG GAGCGGCATC GATCTGGTCC ACGCCGAACT GGGCGGCGGG CGACTGGCGG AGTTTCAAGC GCTGCGCGCG CTGCGTCGGC GCTTCCCGAG GCTGCCGTTG ACCGCGACCG TGCACGATCC CGAGCGGCTG GTCTGGCGGC GCGAGAAACT GCCCTGGCCG TTGTCGGTGG TCAGCGGCAT GCGCTCGCCG CTGCCGGAGA TCGCCACGGT ACTGGCCGAT CCGCTGTGCC TGCATGAAGA ACGGCAACTG GCGCGGCACA TGACCCGTCT GGTGACCCTG ACCCAGGCGG GCAGCCAGAG CCTGCGCCAG CGCATGGGTC TGACAGCGGC GCAGATGGCC GTCATCAATC ACGGCAACCT CGACATCGCC CCCGCGCCGT TGCCGCCATT GAACCCTCTG CGCCTGCTGT ATTTCGGCTT CATTTATCGC GGCAAGGGTA TCGAAGACCT GCTCGATGCG CTGTCCAGCG TATTCATTGC TCAGCCTGCA CTGCGCTCGA GCGTGCGCCT GACCCTGGCC GGCGGCAGCG AGCCGGAAAT GGCCTTCGGC CCATCCGGCA GTTATCTGGA ACAACTGCGA CTGCGCATCC GCCAACTGGG CCTTGTCGAC CTGATCGACT GGCAACTGGA CCTGCCTGCC GAGCAGATCC CGCAGGTGAT CCAGGCCCAC CACGTCATGG TTCTGCCCTA TCGCGAATCG AGCAAACTGA AGATTCTCGG CAAGCTGCGC GGCACCAGTG GCGCGCTGTC GTGGGCGGTG GCCTGTGGCA GAGGCGTAAT CACTTCGGAT GCACGCTCGT TTGCCGAAGA GGTCTCGCAT GGCAACGGCA CGATCTACCC GCAAGGCGAT GTCGAGGGGC TGGCACGAGC CCTGGCGCGT GCCTGCGCAA CACCGGATCT GGTCAGGCTA TGGGCCGACA ACGCCGCGCA GATGGGCAAG GCCAGGGTCT GGAGCCATAC CGCAGAACAT TTTCAGGATG TATTTCGCCA GGCCTGCCAG GAGAAGTGA
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Protein sequence | MRIALLAPLP PEQNGIADYA GHLRHALEGL GLQISTPLQG VGNDPRAAEQ RVAETDWSGI DLVHAELGGG RLAEFQALRA LRRRFPRLPL TATVHDPERL VWRREKLPWP LSVVSGMRSP LPEIATVLAD PLCLHEERQL ARHMTRLVTL TQAGSQSLRQ RMGLTAAQMA VINHGNLDIA PAPLPPLNPL RLLYFGFIYR GKGIEDLLDA LSSVFIAQPA LRSSVRLTLA GGSEPEMAFG PSGSYLEQLR LRIRQLGLVD LIDWQLDLPA EQIPQVIQAH HVMVLPYRES SKLKILGKLR GTSGALSWAV ACGRGVITSD ARSFAEEVSH GNGTIYPQGD VEGLARALAR ACATPDLVRL WADNAAQMGK ARVWSHTAEH FQDVFRQACQ EK
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