Gene Psyr_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3305 
Symbol 
ID3368832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3955601 
End bp3956779 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content65% 
IMG OID637653656 
Productglycosyl transferase, group 1 
Protein accessionYP_236375 
Protein GI66046534 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0317499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.753589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATAG CGTTGCTTGC GCCGCTGCCA CCCGAACAGA ACGGCATCGC CGATTACGCC 
GGACATCTGC GGCATGCGCT TGAAGGCCTG GGTCTGCAGA TCAGTACACC GCTGCAAGGC
GTCGGCAACG ATCCACGCGC TGCAGAACAG CGCGTGGCTG AAACGGACTG GAGCGGCATC
GATCTGGTCC ACGCCGAACT GGGCGGCGGG CGACTGGCGG AGTTTCAAGC GCTGCGCGCG
CTGCGTCGGC GCTTCCCGAG GCTGCCGTTG ACCGCGACCG TGCACGATCC CGAGCGGCTG
GTCTGGCGGC GCGAGAAACT GCCCTGGCCG TTGTCGGTGG TCAGCGGCAT GCGCTCGCCG
CTGCCGGAGA TCGCCACGGT ACTGGCCGAT CCGCTGTGCC TGCATGAAGA ACGGCAACTG
GCGCGGCACA TGACCCGTCT GGTGACCCTG ACCCAGGCGG GCAGCCAGAG CCTGCGCCAG
CGCATGGGTC TGACAGCGGC GCAGATGGCC GTCATCAATC ACGGCAACCT CGACATCGCC
CCCGCGCCGT TGCCGCCATT GAACCCTCTG CGCCTGCTGT ATTTCGGCTT CATTTATCGC
GGCAAGGGTA TCGAAGACCT GCTCGATGCG CTGTCCAGCG TATTCATTGC TCAGCCTGCA
CTGCGCTCGA GCGTGCGCCT GACCCTGGCC GGCGGCAGCG AGCCGGAAAT GGCCTTCGGC
CCATCCGGCA GTTATCTGGA ACAACTGCGA CTGCGCATCC GCCAACTGGG CCTTGTCGAC
CTGATCGACT GGCAACTGGA CCTGCCTGCC GAGCAGATCC CGCAGGTGAT CCAGGCCCAC
CACGTCATGG TTCTGCCCTA TCGCGAATCG AGCAAACTGA AGATTCTCGG CAAGCTGCGC
GGCACCAGTG GCGCGCTGTC GTGGGCGGTG GCCTGTGGCA GAGGCGTAAT CACTTCGGAT
GCACGCTCGT TTGCCGAAGA GGTCTCGCAT GGCAACGGCA CGATCTACCC GCAAGGCGAT
GTCGAGGGGC TGGCACGAGC CCTGGCGCGT GCCTGCGCAA CACCGGATCT GGTCAGGCTA
TGGGCCGACA ACGCCGCGCA GATGGGCAAG GCCAGGGTCT GGAGCCATAC CGCAGAACAT
TTTCAGGATG TATTTCGCCA GGCCTGCCAG GAGAAGTGA
 
Protein sequence
MRIALLAPLP PEQNGIADYA GHLRHALEGL GLQISTPLQG VGNDPRAAEQ RVAETDWSGI 
DLVHAELGGG RLAEFQALRA LRRRFPRLPL TATVHDPERL VWRREKLPWP LSVVSGMRSP
LPEIATVLAD PLCLHEERQL ARHMTRLVTL TQAGSQSLRQ RMGLTAAQMA VINHGNLDIA
PAPLPPLNPL RLLYFGFIYR GKGIEDLLDA LSSVFIAQPA LRSSVRLTLA GGSEPEMAFG
PSGSYLEQLR LRIRQLGLVD LIDWQLDLPA EQIPQVIQAH HVMVLPYRES SKLKILGKLR
GTSGALSWAV ACGRGVITSD ARSFAEEVSH GNGTIYPQGD VEGLARALAR ACATPDLVRL
WADNAAQMGK ARVWSHTAEH FQDVFRQACQ EK