| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3304 |
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| Symbol | |
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| ID | 3368831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 3953610 |
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| End bp | 3955601 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637653655 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_236374 |
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| Protein GI | 66046533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.417507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.816592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA TCCGCTCATT CCGCGACTTG CTGCGCCTGC TGTTCATCTT CCTGCGCGAA
GTCAGGATTA CCGTGCTGGC GACGTTCGTC ATCATTCTTC TGGGCGCGTT TCTGCTCCCT
AACCGCTATG AGTCCACCGC CCTGTTGCTG GTCAAGCCCG GCCGCGACAG CAGCACTGTG
CCAATCGAGT TGTCCGACCG ACAGGCCATC GTGATACCGA GCGGCCTGCG CGATCCGCTG
CTCGACGAGG AGCGCATGCT CAGCGGGCGG CCGATCATGC GTGCCGTGTC CGAGAAATAC
CTCGCCGAGC TGTCCATGGT GCCGCCTGAA ACCGGCGTTC TGGCCTCGGT GAAGAACGGC
ATCAAGACCG TCGTCGGAGC GCTGGTCAAC GGCGTGCGCA GCGTTCTGCA ATTCATCGGG
CTGGTGGAAC ACCGCTCCCA GGCCGAACGT CTGGCCGAGG ATCTGGAGAA AAACTTCAAG
GTCAGCCATG AGCCTGGCTC ATCAGTGATG GAGCTGAGGT TTACCTGGAG CGACCCGGAA
GTCGCGCAGA CCGTGCTCAG GACCTGGATC ACCGAGTACC AGACGCAGCG CACCAAGACA
CTGGGCCGGG TCAGCCTGTA CGCGTTCTAC GAAGCGGAAG TGAAGACGAC CGGTGCGAAC
ATCATCGAGT ACAAGAAGCA AATTCAGAAC TACCTGAACC AGTTGAGCGC GGTAAGTATT
TCCCAGCGTC TGGCCGATAC CTCGCAGGCG CTCAACGATC TGCGCACCGA GCGCAACAAC
ACCACCCGCT CGATTGCCTC GACCAAGGCA GGTCTGGACC TGCTGAAGAA ACAACTGGCA
GAGCAGCCAA AGACCGTCTC GGCAGGCCGC GAACTGGCCC TCAACCCCAA TCGCCAGGAC
TTGCAGAACC GCATCAACGG CAAGGAAGTG GAGCGTCAGG AAATGCTTCG CTCATTCAAG
GACGAGGCGC CACCGATTCG TGCGATCAAC GAGGAAGTCA GTAACCTCAA AAAGCTGCTC
AAGGAACAGG ACGCCACCGT ACAGCGTTCC GAAAGCATCA CGCCCAACCC GATCTACAAC
CGCATGCAGA ACGTGTACGC CGACCAGCAG ACCAGCTACG CGCGCCTGCA AACCCAGTTC
ATCCAGCAGA ACGAGCAAAT CGCGCAACTG GAACGCGACC GCCAGCAGGC ACTGAATCTG
GAGCCGGAAC TGTCACGCCT GCAGAACGAG CTGGATGCGG CAGAAAAAAG CTATGCACTG
TACAAAAACA GCCTGGAAAA ATCGCGTATC GACCGTGAAC TGGACAACAG CCAGATCAGT
AATATCGCGA CCATCGAGGA GGCGACCTTC AACCCCAGCC GGGTATTCCC GAAAAGCCTG
CTGATGCTGT TTCTGGCGTT CCCGCTGAGC GTCGTGGTCG GTGCCGTGGC GCTGTACTTC
TTCTACCTGC TGGACCAGCG CATTCATGAC GGCGACAAGA TCGAAAGCAG CTTCGGTGTT
CCGGTCTGGA CCAGCCTCCC CGACCTGGAA CGTGCCCAGG AACGCAGTGC TGCCCTCACC
TCGAACCTGC ATCGGGTGTA CGGCATTCTG CCGCTGGACC AGGTAGAAGA GCGCGGGCTG
ACCATCGGTT TTACTTCGGT CAAGTACGGG GCCGGCGTGT CGTTCGTGAT CGCGCGCTTG
AGCGCGCTAC TGATCGAACA GGGCCATCGG GTACGCACCG AAGGCCGCAG TCCGGCCATT
CCGGGCGAAA TTGTGCTGAT CAACGCTTCG GCGCTGTCGG CGAACCAGGA TGCCTTCGTG
CTGTTGCGCA AGGCTGACCT GATCGTGCTG GTGGTTCGCG CCCAGGACAC CACGGTGCCG
ATGCTGGAAG ACACGCTGAA CAACCTCAAC ACCGCGTTCA AGAAAGTCGA CGGCATCATC
ATCAACCGTC GTCGCTTCGA AGTGCCTGAA AAGGTCCTGA GTTTTCTCAA GCGGATCGGG
AGCCGAGGCT GA
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| Protein sequence | MINIRSFRDL LRLLFIFLRE VRITVLATFV IILLGAFLLP NRYESTALLL VKPGRDSSTV
PIELSDRQAI VIPSGLRDPL LDEERMLSGR PIMRAVSEKY LAELSMVPPE TGVLASVKNG
IKTVVGALVN GVRSVLQFIG LVEHRSQAER LAEDLEKNFK VSHEPGSSVM ELRFTWSDPE
VAQTVLRTWI TEYQTQRTKT LGRVSLYAFY EAEVKTTGAN IIEYKKQIQN YLNQLSAVSI
SQRLADTSQA LNDLRTERNN TTRSIASTKA GLDLLKKQLA EQPKTVSAGR ELALNPNRQD
LQNRINGKEV ERQEMLRSFK DEAPPIRAIN EEVSNLKKLL KEQDATVQRS ESITPNPIYN
RMQNVYADQQ TSYARLQTQF IQQNEQIAQL ERDRQQALNL EPELSRLQNE LDAAEKSYAL
YKNSLEKSRI DRELDNSQIS NIATIEEATF NPSRVFPKSL LMLFLAFPLS VVVGAVALYF
FYLLDQRIHD GDKIESSFGV PVWTSLPDLE RAQERSAALT SNLHRVYGIL PLDQVEERGL
TIGFTSVKYG AGVSFVIARL SALLIEQGHR VRTEGRSPAI PGEIVLINAS ALSANQDAFV
LLRKADLIVL VVRAQDTTVP MLEDTLNNLN TAFKKVDGII INRRRFEVPE KVLSFLKRIG
SRG
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