Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3303 |
Symbol | |
ID | 3368830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3952813 |
End bp | 3953592 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653654 |
Product | polysaccharide export protein |
Protein accession | YP_236373 |
Protein GI | 66046532 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0200741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCA TGATGCTGAT CGCCAGCTTA TTGCTGTTGA GTGCGTGCAA TACCCCTTCC AGGGTGGGCC TGCCCGATGA CCGTGCGCAA ATCGAGGCCG GCCAGGCTGC GGGCCGCGCA CTGGCTGGCA AGCCGCTGCC GCCGGAGCGA ATCCGCCCCG GCGATACGCT GCGCATCGTG CGCAACAGTG GCGAGGCGCC GTCGATTTCG GCGTTTACCG CCAACTCCAT CTATGAACTG ACCCTGTTTC AGGTGCTCAA CGACGGCACC TTTTCCTACC CTTATATCGG CACCGTCAAG GCTGCGGGCC TGACCCTCCA ACAGTTGAAC GACCTGCTGG AAAGCAAACT GCAGAGCGTC TACCGCGAGA CCGCGCTGAC CATCAACATC TCCCAGTCAC CGGGCAACAC GGTGTTTGTC GGTGGCGCGG TGCGCAACTC GGTCACCTTG CCGGTCAACG TCGCCACCAA CCTCGACCAG GCGATTGTCG GCGCGGGCGG CGTGGCGCTC GATGCCGATG CCGGTCAGGT CGCGCTGCTG CGTCAGGAAG AAAACGGGCT CTACAAGACC TACTTCTTCG ATTACAGCAA ATTCCTCTGG GCAGGCGGCG CCGGTGGCCC TACCGCCCCG GTTCTGTTGA AACGCGGCGA TATCGTGTTC GTTCCCAAAT CATCGGTCGG CAACAAGGTT GACGGCGTAT CCCTGTATTT CAACCAGTTG ATCCCCTTCG CGAAGTCGAT CGGCCTGGGC CTGAACTACG AGCTGCGCAA CAACAATTAA
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Protein sequence | MKSMMLIASL LLLSACNTPS RVGLPDDRAQ IEAGQAAGRA LAGKPLPPER IRPGDTLRIV RNSGEAPSIS AFTANSIYEL TLFQVLNDGT FSYPYIGTVK AAGLTLQQLN DLLESKLQSV YRETALTINI SQSPGNTVFV GGAVRNSVTL PVNVATNLDQ AIVGAGGVAL DADAGQVALL RQEENGLYKT YFFDYSKFLW AGGAGGPTAP VLLKRGDIVF VPKSSVGNKV DGVSLYFNQL IPFAKSIGLG LNYELRNNN
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